RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 NUDCD3Q8IVD9 361 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 EFHD2Q96C19 240 aaPredicted RBP-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 SMDT1Q9H4I9 107 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 ANO10Q9NW15 660 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 IL36GQ9NZH8 169 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 HHLA3Q9XRX5 114 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 RBMX2Q9Y388 322 aaKnown RBP-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 ADAMTSL3P82987 1691 aa-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 PRKDCP78527 4128 aaKnown RBP-3.85□□□□□ -3.03
TRAJ42-201ENST00000390495 AKAP13Q12802 2813 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 FAT3Q8TDW7 4589 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 TMEM235A6NFC5 223 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 CCL25O15444 150 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 TCF21O43680 179 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 ORC5O43913 435 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 ATP5LO75964 103 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 AGR2O95994 175 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 U2AF2P26368 475 aaKnown RBP eCLIP-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 TSPOP30536 169 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 ZYG11AQ6WRX3 759 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 SCGB1D4Q6XE38 83 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 TUSC5Q8IXB3 177 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 OR2M7Q8NG81 312 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 OR56A4Q8NGH8 313 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 RDH12Q96NR8 316 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 SH3GL1Q99961 368 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 ADPGKQ9BRR6 497 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 FTHL17Q9BXU8 183 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 PFDN4Q9NQP4 134 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 MAD2L2Q9UI95 211 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 NUP50Q9UKX7 468 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 N6AMT1Q9Y5N5 214 aa-3.86□□□□□ -3.03
TRAJ42-201ENST00000390495 PTPRJQ12913 1337 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 PCDH11XQ9BZA7 1347 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 LOC100653049A0A140TA62 436 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 FMO6PO60774 539 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 KRT34O76011 436 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 OR7A10O76100 309 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 TDP2O95551 362 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 SERPINA3P01011 423 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 NQO1P15559 274 aaKnown RBP-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 CCR2P41597 374 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 RPL28P46779 137 aaKnown RBP-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 C1orf220Q5T0J3 134 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 HENMT1Q5T8I9 393 aaKnown RBP-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 YIPF7Q8N8F6 280 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 LEMD2Q8NC56 503 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 OR10AC1Q8NH08 325 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 SFXN5Q8TD22 340 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 FGF13Q92913 245 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 PPM1MQ96MI6 270 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 CLCC1Q96S66 551 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 MICU1Q9BPX6 476 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 SLIRPQ9GZT3 109 aaKnown RBP-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 TMEM206Q9H813 350 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 TMEM9BQ9NQ34 198 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 TAC3Q9UHF0 121 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 COL12A1Q99715 3063 aa-3.87□□□□□ -3.03
TRAJ42-201ENST00000390495 TRBV30A0A0K0K1B3 111 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 XKRY2A2RUG3 117 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 ARGFXA6NJG6 315 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 RAD1O60671 282 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 HYPMO75409 117 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 LINC00303Q3SY05 128 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 IFI44LQ53G44 452 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 LPCAT4Q643R3 524 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 CCDC186Q7Z3E2 898 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 SNF8Q96H20 258 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 ALS2CR12Q96Q35 445 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 SECISBP2Q96T21 854 aaKnown RBP-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 MFFQ9GZY8 342 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 RRAGDQ9NQL2 400 aaPredicted RBP-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 PHLDA3Q9Y5J5 127 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 SNX5Q9Y5X3 404 aa-3.88□□□□□ -3.03
TRAJ42-201ENST00000390495 A0A0A6YYD5 115 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 IGHV3OR16-9A0A0B4J2B5 98 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ODAMA1E959 279 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 A8MXE2 369 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 TRBV12-3P01733 135 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 HSPA1LP34931 641 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 GPX4P36969 197 aaPredicted RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ACAA2P42765 397 aaKnown RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 GRB2P62993 217 aaKnown RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ACTG2P63267 376 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 DGUOKQ16854 277 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 FAM43BQ6ZT52 329 aaPredicted RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 DPY19L4Q7Z388 723 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ACOT1Q86TX2 421 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 CLYBLQ8N0X4 340 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ZNF555Q8NEP9 628 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 WFDC5Q8TCV5 224 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 ORAOV1Q8WV07 137 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 OSTF1Q92882 214 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 TMEM230Q96A57 120 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 CXorf40BQ96DE9 158 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 SH3YL1Q96HL8 342 aaPredicted RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 EMC6Q9BV81 110 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 NUP58Q9BVL2 599 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 C8orf33Q9H7E9 229 aaPredicted RBP-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 TTLL3Q9Y4R7 772 aa-3.89□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms