RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
PTPRN2-202ENST00000389416 WDR13Q9H1Z4 485 aa11.47□□□□□ -0.57
PTPRN2-202ENST00000389416 SAP30LQ9HAJ7 183 aa11.47□□□□□ -0.57
PTPRN2-202ENST00000389416 NPAP1Q9NZP6 1156 aa11.47□□□□□ -0.57
PTPRN2-202ENST00000389416 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 SPNP16150 400 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 KITLGP21583 273 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 RPS16P62249 146 aaKnown RBP11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 SSBP1Q04837 148 aaKnown RBP11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 DOCK7Q96N67 2140 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 ANAPC1Q9H1A4 1944 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 ZNF407Q9C0G0 2248 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 LOC102723996A0A087X1L8 192 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 ZIC3O60481 467 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 RAB6AP20340 208 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 SUCLG1P53597 346 aaKnown RBP11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 MRGPRDQ8TDS7 321 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 MYOZ1Q9NP98 299 aaPredicted RBP11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 KIF26BQ2KJY2 2108 aa11.46□□□□□ -0.57
PTPRN2-202ENST00000389416 PPP3CBP16298 524 aa11.46□□□□□ -0.58
PTPRN2-202ENST00000389416 S100A11P31949 105 aa11.46□□□□□ -0.58
PTPRN2-202ENST00000389416 BAXQ07812 192 aa11.46□□□□□ -0.58
PTPRN2-202ENST00000389416 ZNF519Q8TB69 540 aa11.46□□□□□ -0.58
PTPRN2-202ENST00000389416 CHST5Q9GZS9 411 aa11.46□□□□□ -0.58
PTPRN2-202ENST00000389416 A0A1W2PNV4 684 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 TMEM229AB2RXF0 380 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 F8W036 122 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 GNG10P50151 68 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 RAB11AP62491 216 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 GNB1P62873 340 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 HPSE2Q8WWQ2 592 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 GON7Q9BXV9 100 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 TMPRSS2O15393 492 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 AADACP22760 399 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CEACAM6P40199 344 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 OR3A1P47881 315 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 ZNF816Q0VGE8 651 aaPredicted RBP11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 SLC7A5P1Q8MH63 180 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 MAP6Q96JE9 813 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 RAB1BQ9H0U4 201 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 FAM96BQ9Y3D0 163 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CSAG2Q9Y5P2 127 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 TSC2P49815 1807 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 M0R1X1 148 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 HOXD4P09016 255 aaPredicted RBP11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CCL8P80075 99 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 TLE1Q04724 770 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 FOXO1Q12778 655 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 C17orf78Q8N4C9 275 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 POC1BQ8TC44 478 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 TRAV39A0A0B4J263 110 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 A0A1B0GUH1 482 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CYTIPO60759 359 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 KRASP01116 189 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 SCAND1P57086 179 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 LINC01590Q5TEZ4 76 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 FAM213BQ8TBF2 198 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 CACNA1AO00555 2505 aa11.45□□□□□ -0.58
PTPRN2-202ENST00000389416 OR5H14A6NHG9 310 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 ZBTB25P24278 435 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 TMEM128Q5BJH2 165 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 ADAM5Q6NVV9 412 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 CCDC28AQ8IWP9 274 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 PIK3IP1Q96FE7 263 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 ARPC5LQ9BPX5 153 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 LSM2Q9Y333 95 aaKnown RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 ROM1Q03395 351 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 LYG1Q8N1E2 194 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 ZNF488Q96MN9 340 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 MIXL1Q9H2W2 232 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 J3QT63 122 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 SNRNP200O75643 2136 aaKnown RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 GIPP09681 153 aaPredicted RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 PSMB6P28072 239 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 LIMK1P53667 647 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 RPS4XP62701 263 aaKnown RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 RPS27AP62979 156 aaKnown RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 PIGYQ3MUY2 71 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 OR5A2Q8NGI9 324 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 C10orf35Q96D05 121 aa11.44□□□□□ -0.58
PTPRN2-202ENST00000389416 UBTD1Q9HAC8 227 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms