RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LRFN1Q9P244 771 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DOCK11Q5JSL3 2073 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TRBV23-1A0A0A0MS06 115 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FTCDNL1E5RQL4 147 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PRSS44E7EML9 344 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TMEM127O75204 238 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CD8AP01732 235 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RAB11AP62491 216 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 HIST2H3AQ71DI3 136 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LGI3Q8N145 548 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ARHGEF39Q8N4T4 335 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NECAP1Q8NC96 275 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SPTBN1Q01082 2364 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TRANK1O15050 2925 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 C7orf77A4D0Y5 90 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ATXN7O15265 892 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR2C1O95371 312 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TCN2P20062 427 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ANOS1P23352 680 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RUNX1Q01196 453 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DHODHQ02127 395 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF345Q14585 488 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LILRB2Q8N423 598 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SLC26A1Q9H2B4 701 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PISDQ9UG56 409 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 A0A1B0GTI1 187 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MRPL33O75394 65 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SRFP11831 508 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TBPP20226 339 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 BMP5P22003 454 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RHEBQ15382 184 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RHBDD2Q6NTF9 364 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CCDC71LQ8N9Z2 235 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ANXA10Q9UJ72 324 aa12.6□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IGKV1-9A0A0C4DH69 117 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 C5orf49A4QMS7 147 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TRAF3IP2O43734 574 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 WDR1O75083 606 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CST4P01036 141 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IFNA5P01569 189 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IGKV3D-11A0A0A0MRZ8 115 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TMEM14DPA8MWL7 114 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PGA4P0DJD7 388 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PGA3P0DJD8 388 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 EIF1P41567 113 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ARL6IP1Q15041 203 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 HFEQ30201 348 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR8G2PQ6IF36 304 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FDX2Q6P4F2 183 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TMEM230Q96A57 120 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 BSCL2Q96G97 398 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NMES1Q9C002 83 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 WIPF3A6NGB9 483 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MSTNO14793 375 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NPIPB7O75200 414 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MSX1P28360 303 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MEOX2P50222 304 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GPM6AP51674 278 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PLPP5Q8NEB5 264 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SDSLQ96GA7 329 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PFDN5Q99471 154 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MOB1AQ9H8S9 216 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PPP1R3CQ9UQK1 317 aa12.59□□□□□ -0.39
TNFRSF1B-201ENST00000376259 AKAP6Q13023 2319 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 FBP1P09467 338 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CHATP28329 748 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 FOLR3P41439 243 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 PLP2Q04941 152 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 UQCC3Q6UW78 93 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CMTM1Q8IZ96 169 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 NAT6Q93015 286 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 S100PP25815 95 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 TSC22D1Q15714 1073 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 HLA-BQ31612 363 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ABHD3Q8WU67 409 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF488Q96MN9 340 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
TNFRSF1B-201ENST00000376259 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms