RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 NAAAQ02083 359 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 GABRA6Q16445 453 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 TATDN3Q17R31 274 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 SLC22A6Q4U2R8 563 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 Q5PR19 223 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 LIPKQ5VXJ0 399 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 RNF165Q6ZSG1 346 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 TMEM104Q8NE00 496 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 OR5L1Q8NGL2 311 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 OR1F12Q8NHA8 337 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 ASB10Q8WXI3 467 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 ZNF488Q96MN9 340 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 SPXQ9BT56 116 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 EGLN1Q9GZT9 426 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 NELFAQ9H3P2 528 aa6.08□□□□□ -1.44
USP1-202ENST00000371146 YLPM1P49750 1951 aaKnown RBP6.08□□□□□ -1.44
USP1-202ENST00000371146 A6NNC1 897 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 E9PI62 339 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TFP02787 698 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CD8BP10966 210 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PVALBP20472 110 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 MYL9P24844 172 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 PPP3R1P63098 170 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 LINGO2Q7L985 606 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 MYPOPQ86VE0 399 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 ACBD7Q8N6N7 88 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 WFDC11Q8NEX6 87 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 SLC26A10Q8NG04 563 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 ZNRF4Q8WWF5 429 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CORO2AQ92828 525 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 GCDHQ92947 438 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 RHOVQ96L33 236 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 C4orf45Q96LM5 186 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 AMELYQ99218 206 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 COMMD4Q9H0A8 199 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 GPR84Q9NQS5 396 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 SLCO1C1Q9NYB5 712 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 B3GAT1Q9P2W7 334 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PIGLQ9Y2B2 252 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 C22orf46C9J442 243 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CDIPTO14735 213 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TMPRSS2O15393 492 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PTHP01270 115 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 IL1AP01583 271 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CD2P06729 351 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 HEXAP06865 529 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 ARR3P36575 388 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 LIPAP38571 399 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 RBM34P42696 430 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 GPR6P46095 362 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 FHITP49789 147 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 GPM6AP51674 278 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 LCN2P80188 198 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 GK2Q14410 553 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 IRF3Q14653 427 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 LPCAT3Q6P1A2 487 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 WDFY1Q8IWB7 410 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TPRX1Q8N7U7 411 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OR8J1Q8NGP2 316 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OR13C5Q8NGS8 318 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 FGGYQ96C11 551 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 RRNAD1Q96FB5 475 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 KCNK17Q96T54 332 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 MRI1Q9BV20 369 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OR10A2Q9H208 303 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 A0A087X0M5 115 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TRAV39A0A0B4J263 110 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 A0A1B0GX30 115 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 HS3ST1O14792 307 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 SNAPC5O75971 98 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PRSS23O95084 383 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CYB5R3P00387 301 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 HIST1H1BP16401 226 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 SLC2A5P22732 501 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 NFYBP25208 207 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TGM4P49221 684 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 SRP9P49458 86 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 CEBPGP53567 150 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 UCP2P55851 309 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 DHRS7BQ6IAN0 325 aaPredicted RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 TMPRSS11AQ6ZMR5 421 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OR1J2Q8NGS2 313 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OR4K15Q8NH41 348 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CD300LFQ8TDQ1 290 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 OIT3Q8WWZ8 545 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 BORCS8Q96FH0 119 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TIMD4Q96H15 378 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 TMEM208Q9BTX3 173 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 CHST6Q9GZX3 395 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PIGMQ9H3S5 423 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 PRDM13Q9H4Q3 707 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 ZDHHC8Q9ULC8 765 aa6.07□□□□□ -1.44
USP1-202ENST00000371146 NDRG4Q9ULP0 352 aaKnown RBP6.07□□□□□ -1.44
USP1-202ENST00000371146 LOC100289279A0A1B0GTE1 492 aa6.06□□□□□ -1.44
USP1-202ENST00000371146 SLC22A31A6NKX4 558 aa6.06□□□□□ -1.44
USP1-202ENST00000371146 HAX1O00165 279 aa6.06□□□□□ -1.44
USP1-202ENST00000371146 SRSF1Q07955 248 aaKnown RBP eCLIP6.06□□□□□ -1.44
USP1-202ENST00000371146 CNN3Q15417 329 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms