RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SPIN3Q5JUX0 258 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 C1orf100Q5SVJ3 147 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 TPRA1Q86W33 373 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 FAM58AQ8N1B3 248 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 Q8NFD4 153 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 ANGPTL6Q8NI99 470 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 SEH1LQ96EE3 360 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 HMG20AQ9NP66 347 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 RBFOX1Q9NWB1 397 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 NKX6-3A6NJ46 265 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 F8VVB4 439 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 F8VWA3 439 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 SMAD7O15105 426 aaKnown RBP12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 ADAM20O43506 726 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 AIREO43918 545 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 SFTPBP07988 381 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 INHBBP09529 407 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 UBBP0CG47 229 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 PSG2P11465 335 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 RPL5P46777 297 aaKnown RBP12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 GZMKP49863 264 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 NPY4RP50391 375 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 GPR141Q7Z602 305 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 MAPK1IP1LQ8NDC0 245 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 OR6M1Q8NGM8 313 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 MED30Q96HR3 178 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 GLS2Q9UI32 602 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 MRPS28Q9Y2Q9 187 aaKnown RBP12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 V9GY05 133 aa12.97□□□□□ -0.33
PRPF38B-202ENST00000370022 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 B4DSR2 109 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 TMPRSS2O15393 492 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 CSTBP04080 98 aaKnown RBP12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 PRKACAP17612 351 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 RAB3BP20337 219 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 HTR2CP28335 458 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 IL2RGP31785 369 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 FGF12P61328 243 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF146Q15072 292 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 ESCO2Q56NI9 601 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 AWAT2Q6E213 333 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF788Q6ZQV5 615 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 BATF2Q8N1L9 274 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 OR5T2Q8NGG2 359 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 OR4D6Q8NGJ1 314 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF222Q9UK12 451 aa12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
PRPF38B-202ENST00000370022 RFPL4AA6NLU0 287 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 RFPL4AL1F8VTS6 287 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC17A2O00624 439 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 SLC22A1O15245 554 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 FOXH1O75593 365 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 CDRT1O95170 752 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 PRDX2P32119 198 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 PITPNBP48739 271 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 IL13RA1P78552 427 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 DGUOKQ16854 277 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 CYB5R2Q6BCY4 276 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 LINC01356Q8N9X3 169 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 OR51T1Q8NGJ9 327 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 MRPS24Q96EL2 167 aaKnown RBP12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 SDSLQ96GA7 329 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 CCL13Q99616 98 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 GFI1Q99684 422 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 NKX3-1Q99801 234 aaPredicted RBP12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 CENPOQ9BU64 300 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 PLGRKTQ9HBL7 147 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 CLN8Q9UBY8 286 aa12.95□□□□□ -0.34
PRPF38B-202ENST00000370022 SHISA3A0PJX4 238 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 A8MXK9 166 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 GPR37O15354 613 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 SIGLEC5O15389 551 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CHRM2P08172 466 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 IGHV4-31P0DP07 118 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 GTF2F2P13984 249 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CFPP27918 469 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 GABRA2P47869 451 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CAPZA1P52907 286 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 GNB2P62879 340 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 ANKRD13BQ86YJ7 626 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 OSR2Q8N2R0 312 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 ZFAND2BQ8WV99 257 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 GAFA1Q96PS6 74 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 SSBP3Q9BWW4 388 aaPredicted RBP12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CST11Q9H112 138 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 CTSZQ9UBR2 303 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 OR14J1Q9UGF5 321 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
PRPF38B-202ENST00000370022 FAM157AC9JC47 383 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms