RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ERVK11-1P61568 191 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 CCL8P80075 99 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 MRPS10P82664 201 aaKnown RBP10.41□□□□□ -0.74
TUBE1-202ENST00000368662 GDPD1Q8N9F7 314 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 OR11L1Q8NGX0 322 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 EMG1Q92979 244 aaKnown RBP10.41□□□□□ -0.74
TUBE1-202ENST00000368662 BORCS5Q969J3 196 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 GAL3ST1Q99999 423 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 CCDC32Q9BV29 185 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 GCM1Q9NP62 436 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 RASL12Q9NYN1 266 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 PPP1R3CQ9UQK1 317 aa10.41□□□□□ -0.74
TUBE1-202ENST00000368662 USP9YO00507 2555 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-202ENST00000368662 A0A0G2JMP0 313 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 A0A0X1KG70 313 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 A0A1W2PPR1 153 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 IFNL4K9M1U5 179 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 CTDSPLO15194 276 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 NXPH2O95156 264 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 PRKACAP17612 351 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 TAS2R20P59543 309 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 IL13RA2Q14627 380 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 ZNF79Q15937 498 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 PYDC2Q56P42 97 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 BIVMQ86UB2 503 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 MOGAT3Q86VF5 341 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 OR4M2Q8NGB6 313 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 NICN1Q9BSH3 213 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 RAB1BQ9H0U4 201 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 UBTD1Q9HAC8 227 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 MRPS7Q9Y2R9 242 aaKnown RBP10.4□□□□□ -0.74
TUBE1-202ENST00000368662 NPTNQ9Y639 398 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 A1L4Q6 167 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 IRF2P14316 349 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 GLRA1P23415 457 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 PTH2RP49190 550 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 ZNF181Q2M3W8 571 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 MPV17LQ2QL34 196 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 SMIM21Q3B7S5 101 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 SPIN3Q5JUX0 258 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 ZNF826PQ6ZT77 177 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 TRAF4Q9BUZ4 470 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-202ENST00000368662 SRRQ9GZT4 340 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 CLEC4MQ9H2X3 399 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-202ENST00000368662 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
TUBE1-202ENST00000368662 HRNRQ86YZ3 2850 aaPredicted RBP10.4□□□□□ -0.75
TUBE1-202ENST00000368662 ARFGEF3Q5TH69 2177 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 TRAV18A0A075B6X5 111 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 SRRM5B3KS81 715 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 F8VVB4 439 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 F8VWA3 439 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 GEMIN2O14893 280 aaKnown RBP10.39□□□□□ -0.75
TUBE1-202ENST00000368662 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 SOD3P08294 240 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 GABRR1P24046 479 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 TAF9Q16594 264 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 PIGYQ3MUY2 71 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 C20orf204Q6ZNR8 217 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 Q6ZTK2 550 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 C1orf87Q8N0U7 546 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
TUBE1-202ENST00000368662 Q8N402 240 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 LRRC29Q8WV35 223 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 ZNF488Q96MN9 340 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 ABHD1Q96SE0 405 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 VRK1Q99986 396 aaPredicted RBP10.39□□□□□ -0.75
TUBE1-202ENST00000368662 SPACA1Q9HBV2 294 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 PALMDQ9NP74 551 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 GLS2Q9UI32 602 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 HSF4Q9ULV5 492 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 A0A0A6YYD4 124 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 SOCS1O15524 211 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 CD8AP01732 235 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 GSTP1P09211 210 aaKnown RBP10.39□□□□□ -0.75
TUBE1-202ENST00000368662 BLVRBP30043 206 aaPredicted RBP10.39□□□□□ -0.75
TUBE1-202ENST00000368662 ZNF146Q15072 292 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 MOGAT2Q3SYC2 334 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 IZUMO1Q8IYV9 350 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 DTX3Q8N9I9 347 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 NEDD4LQ96PU5 975 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 LAMP3Q9UQV4 416 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 PLEKHA6Q9Y2H5 1048 aa10.39□□□□□ -0.75
TUBE1-202ENST00000368662 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 FOXI3A8MTJ6 420 aaPredicted RBP10.38□□□□□ -0.75
TUBE1-202ENST00000368662 SERPINE3A8MV23 424 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 H7C417 338 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 J3QRK9 145 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 OR7C1O76099 320 aaPredicted RBP10.38□□□□□ -0.75
TUBE1-202ENST00000368662 LHBP01229 141 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 DCTN2Q13561 401 aaKnown RBP10.38□□□□□ -0.75
TUBE1-202ENST00000368662 SPRNQ5BIV9 151 aa10.38□□□□□ -0.75
TUBE1-202ENST00000368662 C16orf87Q6PH81 154 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms