RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SETXQ7Z333 2677 aaKnown RBP10.38□□□□□ -0.75
USF1-203ENST00000368021 WIPF3A6NGB9 483 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 EEF1E1-BLOC1S5C9J1V9 151 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 LDLRAD4O15165 306 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 EEF1E1O43324 174 aaKnown RBP10.38□□□□□ -0.75
USF1-203ENST00000368021 PRAF2O60831 178 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 BPNT1O95861 308 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 NRASP01111 189 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 HCKP08631 526 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 DNASE1P24855 282 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 AZGP1P25311 298 aaKnown RBP10.38□□□□□ -0.75
USF1-203ENST00000368021 CD81P60033 236 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 PITPNAQ00169 270 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 CNN3Q15417 329 aaKnown RBP10.38□□□□□ -0.75
USF1-203ENST00000368021 CDSNQ15517 529 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 KISS1Q15726 138 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 UNQ6126/PRO20091Q6UXV3 157 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 PDZD9Q8IXQ8 264 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 Q8N402 240 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 CSNK2A3Q8NEV1 391 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 STEAP2Q8NFT2 490 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 PIGTQ969N2 578 aa10.38□□□□□ -0.75
USF1-203ENST00000368021 NKX6-2Q9C056 277 aaPredicted RBP10.38□□□□□ -0.75
USF1-203ENST00000368021 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 TMEM272A0A1B0GTI8 110 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 NUDT19A8MXV4 375 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 PLA2G10O15496 165 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 SMPD2O60906 423 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 UBBP0CG47 229 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 ZNF35P13682 527 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 RPS2P15880 293 aaKnown RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 RAB6AP20340 208 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 TUBG1P23258 451 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 MNDAP41218 407 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 ALDH3B1P43353 468 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 DNLZQ5SXM8 178 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 FBXW12Q6X9E4 464 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 SSX8Q7RTT4 187 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 C1orf174Q8IYL3 243 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 PNLDC1Q8NA58 520 aaKnown RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 C15orf40Q8WUR7 153 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 S100PBPQ96BU1 408 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 OR10A4Q9H209 315 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 TUBG2Q9NRH3 451 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 CTDSPLO15194 276 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 CRTAPO75718 401 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 CST4P01036 141 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 CECR9P0C854 216 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 MMP15P51511 669 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 UCP2P55851 309 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 RAB5BP61020 215 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 TSPAN5P62079 268 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 HLXQ14774 488 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 AWAT2Q6E213 333 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 CRIP3Q6Q6R5 217 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 ANGPTL5Q86XS5 388 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 RELL2Q8NC24 303 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 ITLN2Q8WWU7 325 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 MUCL1Q96DR8 90 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 ABHD1Q96SE0 405 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 NKX3-1Q99801 234 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
USF1-203ENST00000368021 SLC25A32Q9H2D1 315 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 GPR173Q9NS66 373 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 DMRT1Q9Y5R6 373 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
USF1-203ENST00000368021 A0A0A6YYH2 397 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 GGT3PA6NGU5 568 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 A6NJ64 397 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 XRCC3O43542 346 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 CTAG2O75638 210 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 CDK2P24941 298 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 PAX6P26367 422 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 PPP1CBP62140 327 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 QRFPP83859 136 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 PPA1Q15181 289 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 TMEM69Q5SWH9 247 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 MTFR2Q6P444 385 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 LHFPL2Q6ZUX7 228 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 OR2W3Q7Z3T1 314 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 SVBPQ8N300 66 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 SPACA5Q96QH8 159 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 GPER1Q99527 375 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 POFUT1Q9H488 388 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 RAB22AQ9UL26 194 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 SLC7A11Q9UPY5 501 aa10.36□□□□□ -0.75
USF1-203ENST00000368021 IGHV1-18A0A0C4DH31 117 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 CD300LBA8K4G0 201 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 CLDN1O95832 211 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 IFNA10P01566 189 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 HEXAP06865 529 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms