RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 HIST1H1DP16402 221 aaKnown RBP11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 F2RL1P55085 397 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 UCP2P55851 309 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 TMPRSS3P57727 454 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 C3AR1Q16581 482 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 RPL7L1Q6DKI1 246 aaKnown RBP11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF561Q8N587 486 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 OR5D14Q8NGL3 314 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 KIRREL1Q96J84 757 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 NICN1Q9BSH3 213 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 TAF9BQ9HBM6 251 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 EDARQ9UNE0 448 aa11.05□□□□□ -0.64
RTFDC1-202ENST00000357348 NPIPA5E9PKD4 350 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MS4A18H0YCH9 400 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 GLAP06280 429 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 FABP1P07148 127 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 TMEM50BP56557 158 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 FMODQ06828 376 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 TBR1Q16650 682 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MS4A18Q3C1V0 323 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 UNQ6494/PRO21346Q6UXR6 183 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 ANGPTL5Q86XS5 388 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 OR51F2Q8NH61 342 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MFSD8Q8NHS3 518 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 PBOV1Q9GZY1 135 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 GSN-AS1Q9NRJ2 163 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 METTL1Q9UBP6 276 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 NPIPA1Q9UND3 350 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 TRAV17A0A0B4J275 112 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MKRN2OSH3BPM6 223 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MED6O75586 246 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MT-ND4LP03901 98 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF17P17021 662 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 NPY4RP50391 375 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF84P51523 738 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 P2RY4P51582 365 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 GFRA1P56159 465 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 RAC1P63000 192 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 POU3F1Q03052 451 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 SURF2Q15527 256 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 SLC9A3R2Q15599 337 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 EIF2S3LQ2VIR3 472 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 LINC00346Q8IVM7 164 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 OR5AS1Q8N127 324 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 OR13G1Q8NGZ3 307 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 SLC25A43Q8WUT9 341 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 CPNE2Q96FN4 548 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 UCN2Q96RP3 112 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 SCRT1Q9BWW7 348 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 OR2S2Q9NQN1 319 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 MED29Q9NX70 200 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 TP53TG5Q9Y2B4 290 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 STARD10Q9Y365 291 aa11.04□□□□□ -0.64
RTFDC1-202ENST00000357348 IGKV1D-43A0A0B4J1Z2 117 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SGCEO43556 437 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SYT7O43581 403 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 RAD51DO75771 328 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 IGHV2-5P01817 119 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 HPNP05981 417 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF93P35789 620 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 FAM3AP98173 230 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SLC10A1Q14973 349 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 FAM76BQ5HYJ3 339 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 H1FNTQ75WM6 255 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 GGNQ86UU5 652 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 COMMD1Q8N668 190 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 ZCCHC14Q8WYQ9 949 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 RAB3CQ96E17 227 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 C14orf79Q96F83 325 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CLCC1Q96S66 551 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 EMC6Q9BV81 110 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 ARV1Q9H2C2 271 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CHST11Q9NPF2 352 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SOCS1O15524 211 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CXCL13O43927 109 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CDC14BO60729 498 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 EIF1BO60739 113 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 ZNF708P17019 499 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CD80P33681 288 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 THBS4P35443 961 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 GNALP38405 381 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 DAP3P51398 398 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 CLDN15P56746 228 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 RBM39Q14498 530 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 SMCO1Q147U7 214 aa11.03□□□□□ -0.64
RTFDC1-202ENST00000357348 RBMS3Q6XE24 437 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms