RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 TRAV1-2A0A0B4J238 106 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 RFPL4AA6NLU0 287 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 F5H0A9 414 aaPredicted RBP18.47■□□□□ 0.55
SHMT1-203ENST00000354098 RFPL4AL1F8VTS6 287 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 ADAM20O43506 726 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 INHBBP09529 407 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 RPS2P15880 293 aaKnown RBP18.47■□□□□ 0.55
SHMT1-203ENST00000354098 CEBPDP49716 269 aaPredicted RBP18.47■□□□□ 0.55
SHMT1-203ENST00000354098 FAM58AQ8N1B3 248 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 SMR3AQ99954 134 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 FUNDC2Q9BWH2 189 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 MIOXQ9UGB7 285 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 ZANQ9Y493 2812 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 TMPRSS2O15393 492 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 NDUFA2O43678 99 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 IGHV4-31P0DP07 118 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 CD37P11049 281 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 PRKACAP17612 351 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 GABRA2P47869 451 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 SNU13P55769 128 aaKnown RBP18.47■□□□□ 0.55
SHMT1-203ENST00000354098 GLT8D1Q68CQ7 371 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 Q8IYB0 196 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 CD177Q8N6Q3 437 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 RAB39BQ96DA2 213 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 UQCC2Q9BRT2 126 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 OR14J1Q9UGF5 321 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 ZNF222Q9UK12 451 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 GSTK1Q9Y2Q3 226 aa18.47■□□□□ 0.55
SHMT1-203ENST00000354098 MRPS28Q9Y2Q9 187 aaKnown RBP18.47■□□□□ 0.55
SHMT1-203ENST00000354098 MED13LQ71F56 2210 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 AIREO43918 545 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 FCN3O75636 299 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 MYL9P24844 172 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 DUSP1P28562 367 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 TGFBR1P36897 503 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 OR10A3P58181 314 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 RSU1Q15404 277 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 ATPAF1Q5TC12 328 aaPredicted RBP18.46■□□□□ 0.55
SHMT1-203ENST00000354098 GLIPR1L1Q6UWM5 242 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 FAM216BQ8N7L0 139 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 NEIL1Q96FI4 390 aaPredicted RBP18.46■□□□□ 0.55
SHMT1-203ENST00000354098 LPAR2Q9HBW0 351 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 HMG20AQ9NP66 347 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 METRNQ9UJH8 293 aa18.46■□□□□ 0.55
SHMT1-203ENST00000354098 SMIM30A4D0T7 59 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 HEXAP06865 529 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 SELLP14151 372 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 PRDX2P32119 198 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 LSM3P62310 102 aaKnown RBP18.45■□□□□ 0.54
SHMT1-203ENST00000354098 C1orf100Q5SVJ3 147 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 AWAT2Q6E213 333 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 ZNF841Q6ZN19 808 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 ZNF788Q6ZQV5 615 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 FOXRED1Q96CU9 486 aaPredicted RBP18.45■□□□□ 0.54
SHMT1-203ENST00000354098 MSI2Q96DH6 328 aaKnown RBP18.45■□□□□ 0.54
SHMT1-203ENST00000354098 C1orf147Q96MC9 270 aaPredicted RBP18.45■□□□□ 0.54
SHMT1-203ENST00000354098 KCTD7Q96MP8 289 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 GAFA1Q96PS6 74 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 S100A13Q99584 98 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 METTL9Q9H1A3 318 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 KAAG1Q9UBP8 84 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 ABCA2Q9BZC7 2435 aa18.45■□□□□ 0.54
SHMT1-203ENST00000354098 A0A1W2PP11 408 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 PHF1O43189 567 aaPredicted RBP18.44■□□□□ 0.54
SHMT1-203ENST00000354098 HTR3BO95264 441 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 KNG1P01042 644 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 ZFP36P26651 326 aaKnown RBP18.44■□□□□ 0.54
SHMT1-203ENST00000354098 KRTAP1-1Q07627 177 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 NR2C2APQ86WQ0 139 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 FGFRL1Q8N441 504 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 OR8B3Q8NGG8 313 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 C1orf159Q96HA4 380 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 OR8B2Q96RD0 313 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 NAA50Q9GZZ1 169 aaKnown RBP18.44■□□□□ 0.54
SHMT1-203ENST00000354098 V9GY05 133 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 YLPM1P49750 1951 aaKnown RBP18.44■□□□□ 0.54
SHMT1-203ENST00000354098 SERPINA2P20848 420 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 IKZF1Q13422 519 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 TIMM50Q3ZCQ8 353 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 SLC22A6Q4U2R8 563 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 ELP2Q6IA86 826 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 GDPGP1Q6ZNW5 385 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 NLRC3Q7RTR2 1065 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 ZNRF1Q8ND25 227 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 RHOFQ9HBH0 211 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 IL36GQ9NZH8 169 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 MAB21L2Q9Y586 359 aa18.44■□□□□ 0.54
SHMT1-203ENST00000354098 PDCD5O14737 125 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 FOSL1P15407 271 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 RAB3BP20337 219 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 HTR2CP28335 458 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 SDC2P34741 201 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 PITPNBP48739 271 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 MTNR1BP49286 362 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 FGF12P61328 243 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 DGUOKQ16854 277 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 SLC36A1Q7Z2H8 476 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 GPR141Q7Z602 305 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 Q8NFD4 153 aa18.43■□□□□ 0.54
SHMT1-203ENST00000354098 TBC1D15Q8TC07 691 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms