RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FAAP24Q9BTP7 215 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 AICDAQ9GZX7 198 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ZMAT4Q9H898 229 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 PROCRQ9UNN8 238 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ADAM18Q9Y3Q7 739 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 RNF115Q9Y4L5 304 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 TRAV1-2A0A0B4J238 106 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 A6NIZ1 184 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 PLPP2O43688 288 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 OR1F1O43749 312 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 SOX14O95416 240 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 TK1P04183 234 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 PPIBP23284 216 aaKnown RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 CD80P33681 288 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 UBE2MP61081 183 aaKnown RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 FDX2Q6P4F2 183 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 UNQ6126/PRO20091Q6UXV3 157 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 GPSM1Q86YR5 675 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 LILRA3Q8N6C8 439 aaPredicted RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 OR2M3Q8NG83 312 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 OR4K5Q8NGD3 323 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 SPRYD4Q8WW59 207 aaPredicted RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 ASB17Q8WXJ9 295 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF775Q96BV0 537 aaPredicted RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 PANX1Q96RD7 426 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 INTS14Q96SY0 518 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 MICU1Q9BPX6 476 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 POLR2J3Q9H1A7 115 aaKnown RBP6.34□□□□□ -1.4
ZNF540-202ENST00000343599 FOXJ3Q9UPW0 622 aa6.34□□□□□ -1.4
ZNF540-202ENST00000343599 KNTC1P50748 2209 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 M0R036 132 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 KCNAB3O43448 404 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 CYB5R3P00387 301 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-202ENST00000343599 MELTFP08582 738 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
ZNF540-202ENST00000343599 ATF1P18846 271 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 DTYMKP23919 212 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 EFNA4P52798 201 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 HMGCS1Q01581 520 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 RGNQ15493 299 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 TNFAIP8L2Q6P589 184 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF440Q8IYI8 595 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SECTM1Q8WVN6 248 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 PPCDCQ96CD2 204 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 CMBLQ96DG6 245 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SLC41A3Q96GZ6 507 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF681Q96N22 645 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 COMMD4Q9H0A8 199 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 MYNNQ9NPC7 610 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 PARP11Q9NR21 331 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 KLK11Q9UBX7 282 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 TRBV4-1A0A0J9YWV2 114 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 C20orf202A1L168 122 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 H3BN98 237 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 FFAR1O14842 300 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 HLA-GP17693 338 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SDC1P18827 310 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 AQP1P29972 269 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 CLDN12P56749 244 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 IRF8Q02556 426 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SPINK14Q6IE38 97 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 OR2T2Q6IF00 324 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 TMPPEQ6ZT21 453 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SLC35E3Q7Z769 313 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 CMTM4Q8IZR5 234 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 SIRT6Q8N6T7 355 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 INO80EQ8NBZ0 244 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-202ENST00000343599 OR2V1Q8NHB1 315 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 TMED6Q8WW62 240 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 ESAMQ96AP7 390 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 IPPKQ9H8X2 491 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 HAO2Q9NYQ3 351 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 KLHL13Q9P2N7 655 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 PITPNC1Q9UKF7 332 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 C5orf42Q9H799 3197 aa6.33□□□□□ -1.4
ZNF540-202ENST00000343599 NPIPB13A6NJU9 1138 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 NPIPB4C9JG80 1138 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 CCL25O15444 150 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF432O94892 652 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 NKX2-2O95096 273 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 AHSA1O95433 338 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 MT-ND5P03915 603 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 IFNA6P05013 189 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 SELEP16581 610 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 PSMB6P28072 239 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 RBM34P42696 430 aaKnown RBP6.32□□□□□ -1.4
ZNF540-202ENST00000343599 KIR2DL2P43627 348 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-202ENST00000343599 LPAR6P43657 344 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF133P52736 654 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-202ENST00000343599 UCP2P55851 309 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 VAMP2P63027 116 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 HTD2P86397 168 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 SYPL1Q16563 259 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 TEX38Q6PEX7 206 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 Q6ZT83 130 aa6.32□□□□□ -1.4
ZNF540-202ENST00000343599 TMEM183AQ8IXX5 376 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms