RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FPR2P25090 351 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 H2BFSP57053 126 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 RPS4XP62701 263 aaKnown RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 LHX4Q969G2 390 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 GNPNAT1Q96EK6 184 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 SLC17A5Q9NRA2 495 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 GOLT1BQ9Y3E0 138 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 XIRP1Q702N8 1843 aaKnown RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF729A6NN14 1252 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF727A8MUV8 499 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 CST2P09228 141 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF32P17041 273 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 GPR12P47775 334 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 EFNB2P52799 333 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF787Q6DD87 383 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF574Q6ZN55 896 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 DEFB123Q8N688 67 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 HIST1H2BAQ96A08 127 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 HIF1ANQ9NWT6 349 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 COA4Q9NYJ1 87 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 TREM2Q9NZC2 230 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 METTL1Q9UBP6 276 aaKnown RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 KLF13Q9Y2Y9 288 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 POMT1Q9Y6A1 747 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 SCN4AP35499 1836 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 XKRY2A2RUG3 117 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 LRP5LA4QPB2 252 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 H0Y8G0 127 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 NDUFA2O43678 99 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 SOX15O60248 233 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 TMEM127O75204 238 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 CT45A8P0DMV1 189 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 CT45A9P0DMV2 189 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 CT45A2Q5DJT8 189 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF770Q6IQ21 691 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 CD200R1LQ6Q8B3 271 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 ZADH2Q8N4Q0 377 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 SNX22Q96L94 193 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 MRPS18AQ9NVS2 196 aaKnown RBP7.15□□□□□ -1.26
UBE4B-202ENST00000343090 KLHDC2Q9Y2U9 406 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 MTCH2Q9Y6C9 303 aa7.15□□□□□ -1.26
UBE4B-202ENST00000343090 OR5H1A6NKK0 313 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 M0R1B8 84 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.27
UBE4B-202ENST00000343090 TMEM11P17152 192 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 FUT5Q11128 374 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 LSRQ86X29 649 aaPredicted RBP7.15□□□□□ -1.27
UBE4B-202ENST00000343090 ZDHHC22Q8N966 263 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 OR8B12Q8NGG6 310 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 PTPMT1Q8WUK0 201 aaPredicted RBP7.15□□□□□ -1.27
UBE4B-202ENST00000343090 PRRX2Q99811 253 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 GPR87Q9BY21 358 aa7.15□□□□□ -1.27
UBE4B-202ENST00000343090 SLC22A20A6NK97 555 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 C4orf47A7E2U8 309 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 DHRS3O75911 302 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SFT2D2O95562 160 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 FUT3P21217 361 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 GALNSP34059 522 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 ZXDAP98168 799 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 PMS2P11Q13670 270 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 ASB10Q8WXI3 467 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SPSB2Q99619 263 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 LHX9Q9NQ69 397 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SOCS1O15524 211 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 GABRA4P48169 554 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 NXPH1P58417 271 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 NANOS3P60323 173 aaKnown RBP7.14□□□□□ -1.27
UBE4B-202ENST00000343090 TMEM267Q0VDI3 215 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-202ENST00000343090 FUT7Q11130 342 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SURF2Q15527 256 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-202ENST00000343090 VAMP3Q15836 100 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 PRSS54Q6PEW0 395 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 TOMM20LQ6UXN7 152 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 ZNF66Q6ZN08 573 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 ZNF485Q8NCK3 441 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 DTD1Q8TEA8 209 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 RIMS4Q9H426 269 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-202ENST00000343090 NPDC1Q9NQX5 325 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SIRT7Q9NRC8 400 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 FZR1Q9UM11 496 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 MYO16Q9Y6X6 1858 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SIPA1L1O43166 1804 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 CCDC187A0A096LP49 1063 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 A0A1W2PQF6 199 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SHISA3A0PJX4 238 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 OR4C45A6NMZ5 311 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 C4orf51C9J302 202 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 TCF21O43680 179 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 CRHP06850 196 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 SLC25A4P12235 298 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 DMWDQ09019 674 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 OR1C1Q15619 314 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 TSPO2Q5TGU0 170 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 C1orf53Q5VUE5 145 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 GCNT2Q8N0V5 402 aa7.14□□□□□ -1.27
UBE4B-202ENST00000343090 ZNF439Q8NDP4 499 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms