RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 IL36GQ9NZH8 169 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 SCOCQ9UIL1 159 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 ACANP16112 2415 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 IGHV3OR15-7A0A075B7D8 119 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 AIREO43918 545 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 CSTBP04080 98 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 SFTPBP07988 381 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 PSG2P11465 335 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 BCL3P20749 454 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 PRDX2P32119 198 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 OR3A4PP47883 348 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 MTNR1BP49286 362 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 NPY4RP50391 375 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 ZNF146Q15072 292 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 RSU1Q15404 277 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 SPIN3Q5JUX0 258 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 ZNF788Q6ZQV5 615 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 C1QL2Q7Z5L3 287 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 MRPS24Q96EL2 167 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 OR8B2Q96RD0 313 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 ING4Q9UNL4 249 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.36
SEC13-201ENST00000337354 V9GY05 133 aa12.83□□□□□ -0.36
SEC13-201ENST00000337354 LOC100506127A0A0U1RQW1 187 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 B4DSR2 109 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 F8VVB4 439 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 F8VWA3 439 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 GPR37O15354 613 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 ADAM20O43506 726 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 FOXH1O75593 365 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 UBBP0CG47 229 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 FGF12P61328 243 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 CYB5R2Q6BCY4 276 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 LYPD2Q6UXB3 125 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 MAPK1IP1LQ8NDC0 245 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 OR6M1Q8NGM8 313 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 SDSLQ96GA7 329 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 FUNDC2Q9BWH2 189 aa12.82□□□□□ -0.36
SEC13-201ENST00000337354 ELL3Q9HB65 397 aaPredicted RBP12.82□□□□□ -0.36
SEC13-201ENST00000337354 RBFOX1Q9NWB1 397 aaKnown RBP12.82□□□□□ -0.36
SEC13-201ENST00000337354 IGKV1D-17A0A075B6S4 117 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 NKX6-3A6NJ46 265 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SLC22A1O15245 554 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CDRT1O95170 752 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CHRM2P08172 466 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GTF2F2P13984 249 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 PRKACAP17612 351 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 AMY2BP19961 511 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 RAB3BP20337 219 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 HTR2CP28335 458 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 IL2RGP31785 369 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GABRA2P47869 451 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 IL13RA1P78552 427 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 AWAT2Q6E213 333 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GLIPR1L1Q6UWM5 242 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GPR141Q7Z602 305 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 BIVMQ86UB2 503 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 ZNF561Q8N587 486 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 OR4D6Q8NGJ1 314 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 OR51T1Q8NGJ9 327 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CCL13Q99616 98 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SMR3AQ99954 134 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GSX1Q9H4S2 264 aaPredicted RBP12.81□□□□□ -0.36
SEC13-201ENST00000337354 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 ZNF222Q9UK12 451 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SHISA3A0PJX4 238 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SLC17A2O00624 439 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SH2D1BO14796 132 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 SIGLEC5O15389 551 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 NDUFB3O43676 98 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 IGHV4-31P0DP07 118 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CFPP27918 469 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 PITPNBP48739 271 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CAPZA1P52907 286 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 GNB2P62879 340 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 DGUOKQ16854 277 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 NHLRC3Q5JS37 347 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 FAM166AQ6J272 317 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 ZNF841Q6ZN19 808 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 BATF2Q8N1L9 274 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 POM121Q96HA1 1249 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 CENPOQ9BU64 300 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms