RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 HKR1P10072 659 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 GDF1P27539 372 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SULT1A2P50226 295 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
CCDC172-201ENST00000333254 BLOC1S1P78537 153 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF92Q03936 586 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 MALLQ13021 153 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 TMEM187Q14656 261 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 TAF9Q16594 264 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 IAH1Q2TAA2 248 aaPredicted RBP9.3□□□□□ -0.92
CCDC172-201ENST00000333254 FAM122CQ6P4D5 195 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SPAG16Q8N0X2 631 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SVBPQ8N300 66 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 CCDC71LQ8N9Z2 235 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 AKR7LQ8NHP1 331 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 MAFIPQ8WZ33 124 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 GUCD1Q96NT3 240 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SYT3Q9BQG1 590 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SULT4A1Q9BR01 284 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 FAAP24Q9BTP7 215 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 NKX6-2Q9C056 277 aaPredicted RBP9.3□□□□□ -0.92
CCDC172-201ENST00000333254 ARV1Q9H2C2 271 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF703Q9H7S9 590 aaPredicted RBP9.3□□□□□ -0.92
CCDC172-201ENST00000333254 C12orf4Q9NQ89 552 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 ASF1BQ9NVP2 202 aa9.3□□□□□ -0.92
CCDC172-201ENST00000333254 SPRY1O43609 319 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ANGPTL7O43827 346 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 KNG1P01042 644 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 HOXB5P09067 269 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 EDN3P14138 238 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 FUT3P21217 361 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GLP1RP43220 463 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 LHX2P50458 406 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RPS18P62269 152 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 SRPXP78539 464 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 MST1LQ2TV78 715 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GGNBP1Q5YKI7 109 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RAB11FIP2Q7L804 512 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 DPPA2Q7Z7J5 298 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 FAM71E2Q8N5Q1 922 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 OR2M7Q8NG81 312 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 OR51F2Q8NH61 342 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GTF3AQ92664 365 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 CYYR1Q96J86 154 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PRRX2Q99811 253 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RSRP1Q9BUV0 290 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 MS4A7Q9GZW8 240 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 FAM86C1Q9NVL1 165 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ABI3Q9P2A4 366 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 COLQQ9Y215 455 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ST3GAL6Q9Y274 331 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 STARD10Q9Y365 291 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF850A8MQ14 1090 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 E5RGE8 158 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 TOR1AO14656 332 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 TSPAN4O14817 238 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GEMIN2O14893 280 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 MRPL33O75394 65 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 TRAPPC6AO75865 159 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 NEURL1O76050 574 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GLAP06280 429 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 CTRB1P17538 263 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RPL12P30050 165 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 CLDN18P56856 261 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PIGPP57054 158 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RND3P61587 244 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PABPC1L2AQ5JQF8 200 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 GPR157Q5UAW9 335 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PLCXD3Q63HM9 321 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 CTRB2Q6GPI1 263 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 LIAT1Q6ZQX7 453 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 FBXL14Q8N1E6 418 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 CLRN3Q8NCR9 226 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 FGFBP3Q8TAT2 258 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ABHD14BQ96IU4 210 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 IP6K3Q96PC2 410 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 HDHD3Q9BSH5 251 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 LIME1Q9H400 295 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 COQ3Q9NZJ6 369 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 LRFN1Q9P244 771 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 ZNF629Q9UEG4 869 aaPredicted RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 PURGQ9UJV8 347 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 NOSIPQ9Y314 301 aaKnown RBP9.29□□□□□ -0.92
CCDC172-201ENST00000333254 NSG2Q9Y328 171 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 A0A0C4DFX4 3053 aa9.29□□□□□ -0.92
CCDC172-201ENST00000333254 DUXBA0A1W2PPF3 345 aa9.28□□□□□ -0.92
CCDC172-201ENST00000333254 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms