RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GYPAP02724 150 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 CSTBP04080 98 aaKnown RBP14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 WNT2P09544 360 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 PITPNBP48739 271 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 FGF12P61328 243 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF146Q15072 292 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 AWAT2Q6E213 333 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 C22orf42Q6IC83 251 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 CRIP3Q6Q6R5 217 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 LINC00596Q86U02 117 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF561Q8N587 486 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 OR13F1Q8NGS4 319 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 SDSLQ96GA7 329 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 POM121Q96HA1 1249 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 PPIL3Q9H2H8 161 aaKnown RBP14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 CNTD2Q9H8S5 307 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 ELL3Q9HB65 397 aaPredicted RBP14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 HMG20AQ9NP66 347 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 CLN8Q9UBY8 286 aa14.95□□□□□ -0.02
SSSCA1-201ENST00000309328 IGHV3OR15-7A0A075B7D8 119 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 ANGPTL7O43827 346 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 TMEM127O75204 238 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 ECDO95905 644 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 PSG2P11465 335 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 BCL3P20749 454 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 GATA3P23771 443 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 CFPP27918 469 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 GMFBP60983 142 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 GNB2P62879 340 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 IL13RA2Q14627 380 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 LRRC10Q5BKY1 277 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 NHLRC3Q5JS37 347 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 C1orf100Q5SVJ3 147 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 CD276Q5ZPR3 534 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF788Q6ZQV5 615 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 LYPD6Q86Y78 171 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 CIARTQ8N365 385 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 YIPF6Q96EC8 236 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 DMRTB1Q96MA1 342 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 SSBP3Q9BWW4 388 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM234AQ9H0X4 552 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 CST11Q9H112 138 aa14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 RBFOX1Q9NWB1 397 aaKnown RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 MRPS28Q9Y2Q9 187 aaKnown RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 POLR3KQ9Y2Y1 108 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-201ENST00000309328 TRAV20A0A0B4J274 112 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 IGKV1-12A0A0C4DH73 117 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 RFPL4AA6NLU0 287 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 RFPL4AL1F8VTS6 287 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 SLC22A1O15245 554 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 SIGLEC5O15389 551 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 NDUFB3O43676 98 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 AIREO43918 545 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 IGKV1D-12P01611 117 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 MSMBP08118 114 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 CHRM2P08172 466 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 GTF2F2P13984 249 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 PRKACAP17612 351 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 ADRA2CP18825 462 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 GADD45AP24522 165 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 HTR2CP28335 458 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 PRDX2P32119 198 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 GABRA2P47869 451 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 OR3A4PP47883 348 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 DGUOKQ16854 277 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 GPR141Q7Z602 305 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 CHST4Q8NCG5 386 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 OR51T1Q8NGJ9 327 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 PPP1R35Q8TAP8 253 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 CHCHD6Q9BRQ6 235 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 OR51E2Q9H255 320 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 PLGRKTQ9HBL7 147 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 OR5V1Q9UGF6 321 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF222Q9UK12 451 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 ING4Q9UNL4 249 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 V9GY05 133 aa14.93□□□□□ -0.02
SSSCA1-201ENST00000309328 IGKV1D-17A0A075B6S4 117 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 LOC100506127A0A0U1RQW1 187 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 SLC17A2O00624 439 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 SH2D1BO14796 132 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 CD5LO43866 347 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 BPNT1O95861 308 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 SFTPBP07988 381 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 IGHV4-31P0DP07 118 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 RAB3BP20337 219 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 RPL5P46777 297 aaKnown RBP14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 NPBWR2P48146 333 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 ALDH3B2P48448 385 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 CAV3P56539 151 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 GLIPR1L1Q6UWM5 242 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 GLCCI1Q86VQ1 547 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 C19orf18Q8NEA5 215 aa14.92□□□□□ -0.02
SSSCA1-201ENST00000309328 HIVEP1P15822 2718 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 TFAP2AP05549 437 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 IL2RGP31785 369 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 DVL1P1P54792 670 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM189A2Q15884 450 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 RAB11BQ15907 218 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 SLC22A6Q4U2R8 563 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms