RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 AZGP1P25311 298 aaKnown RBP21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 MTCP1P56278 107 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 RPL15P61313 204 aaKnown RBP21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 ACSM1Q08AH1 577 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 KLRD1Q13241 179 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 OR52I1Q8NGK6 324 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 APH1BQ8WW43 257 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 ISG20L2Q9H9L3 353 aaKnown RBP21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 IGKV1-9A0A0C4DH69 117 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 hCG_1809904A0A1W2PP81 198 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 A0A1W2PPE2 198 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 A0A1W2PR64 198 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 A0A1W2PRV1 198 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 POM121CA8CG34 1229 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 IER3P46695 156 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 DLX1P56177 255 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 PRB3Q04118 309 aaPredicted RBP21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 TMEM200BQ69YZ2 307 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 DYRK2Q92630 601 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 NEK6Q9HC98 313 aa21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 SF3B6Q9Y3B4 125 aaKnown RBP21.65■■□□□ 1.06
CDKN2A-201ENST00000304494 TMEM212A6NML5 194 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 K7N7A8 449 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 CCDC159P0C7I6 412 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 GBX2P52951 348 aaPredicted RBP21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 COL10A1Q03692 680 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 SHISA2Q6UWI4 295 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 PACRGLQ8N7B6 248 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 ASCC1Q8N9N2 400 aaKnown RBP21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 OR51A4Q8NGJ6 313 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 OR10AC1Q8NH08 325 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 EMG1Q92979 244 aaKnown RBP21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 OPALINQ96PE5 141 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNF649Q9BS31 505 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 COMMD4Q9H0A8 199 aa21.64■■□□□ 1.05
CDKN2A-201ENST00000304494 A0A1W2PRD5 423 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 A0A1W2PRF3 423 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 A0A1W2PRM7 423 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 F8VVB4 439 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 F8VWA3 439 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 INMTO95050 263 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 PAHP00439 452 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 IGHV4-59P01825 116 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 MT-ND2P03891 347 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 SAA4P35542 130 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 POU3F4P49335 361 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 LRRC36Q1X8D7 754 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 OR4M1Q8NGD0 313 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 SGMS2Q8NHU3 365 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 JAM3Q9BX67 310 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 SEBOXQ9HB31 216 aaPredicted RBP21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNRD1Q9P1U0 126 aa21.63■■□□□ 1.05
CDKN2A-201ENST00000304494 A0A1B0GUS0 222 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 IRGMA1A4Y4 181 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 MEIOCA2RUB1 952 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 BTBD17A6NE02 478 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 WBP4O75554 376 aaKnown RBP21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNF691Q5VV52 312 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 TTC23Q5W5X9 447 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 OR4F5Q8NH21 305 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 OR5AK2Q8NH90 309 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 FGF20Q9NP95 211 aaPredicted RBP21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 MMP24Q9Y5R2 645 aa21.62■■□□□ 1.05
CDKN2A-201ENST00000304494 TRBV2A0A0J9YWF9 115 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 ANGPTL7O43827 346 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 ZFPL1O95159 310 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 PDZK1IP1Q13113 114 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 RCN1Q15293 331 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 SMN1Q16637 294 aaKnown RBP21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 MIDNQ504T8 468 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 GDPD3Q7L5L3 318 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 PNKDQ8N490 385 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 OR13C9Q8NGT0 318 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 TAF15Q92804 592 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 ZCCHC4Q9H5U6 513 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 HEXA-AS1Q9H8Q6 139 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 GLS2Q9UI32 602 aa21.61■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNF737O75373 536 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 NDUFA7O95182 113 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 HAND1O96004 215 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 MDKP21741 143 aaPredicted RBP21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 OMGP23515 440 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 DCKP27707 260 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 RAG2P55895 527 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 SPIN3Q5JUX0 258 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 SERPINA12Q8IW75 414 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 OR8H2Q8N162 312 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 FAM58AQ8N1B3 248 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 SETD9Q8NE22 299 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 OR5D14Q8NGL3 314 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 CYGBQ8WWM9 190 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 SNX22Q96L94 193 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 BEX1Q9HBH7 125 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 RBFOX1Q9NWB1 397 aaKnown RBP21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 C1RLQ9NZP8 487 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 DHDHQ9UQ10 334 aa21.6■■□□□ 1.05
CDKN2A-201ENST00000304494 E9PI62 339 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 GPR137BO60478 399 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 LIMS3P0CW19 117 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 LIMS4P0CW20 117 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms