RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DNAJA3Q96EY1 480 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 POM121Q96HA1 1249 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 ANKRD20A5PA0PJZ0 165 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 PQLC2LA1A4F0 135 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 PRSS56P0CW18 603 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 IAPPP10997 89 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HOXB1P14653 301 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 CA7P43166 264 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 EMP1P54849 157 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 MICBQ29980 383 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TMEM40Q8WWA1 233 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 RDH5Q92781 318 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SYT11Q9BT88 431 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 PRDM7Q9NQW5 492 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 FGF21Q9NSA1 209 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SLCO1C1Q9NYB5 712 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TRAV9-1A0A075B6T8 112 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 C9orf170A2RU37 121 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 J3KTA2 159 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 NDUFB3O43676 98 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 LYZL6O75951 148 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CDX1P47902 265 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 SLC35B1P78383 322 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GABRA6Q16445 453 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TMEM30BQ3MIR4 351 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 C19orf54Q5BKX5 351 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HSD11B1LQ7Z5J1 315 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR13G1Q8NGZ3 307 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SRD5A3Q9H8P0 318 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 FRG2CA6NGY1 282 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 AKR7A2O43488 359 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 IL4P05112 153 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CXCL12P48061 93 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CTSCP53634 463 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 ZNF141Q15928 474 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TMEM52BQ4KMG9 183 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 MEX3DQ86XN8 651 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 RPEQ96AT9 228 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 DERL3Q96Q80 235 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CES1P1Q9UKY3 287 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 C3orf85A0A1B0GTC6 90 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 DHHO43323 396 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR2J2O76002 312 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 BCL2P10415 239 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 POLR2IP36954 125 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 WNT3P56703 355 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 RPL18Q07020 188 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 ZNF252P-AS1Q0IIN9 211 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 UBALD2Q8IYN6 164 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SLC16A11Q8NCK7 471 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR5M1Q8NGP8 315 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 ROBO4Q8WZ75 1007 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HMGN4O00479 90 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TMPRSS11DO60235 418 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CST7O76096 145 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TSPAN13O95857 204 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GRPP07492 148 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HAAOP46952 286 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TMEM33P57088 247 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TAS2R60P59551 318 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GNB1P62873 340 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 C1orf61Q13536 156 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 DEFB110Q30KQ9 67 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SLC25A30Q5SVS4 291 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 RIMKLAQ8IXN7 391 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GUCD1Q96NT3 240 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GLRX2Q9NS18 164 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 KLK8O60259 260 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 CRYABP02511 175 aaKnown RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 MMP16P51512 607 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 KLF3P57682 345 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 MLF1P58340 268 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 RELQ04864 619 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 SPRED3Q2MJR0 410 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 HFEQ30201 348 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 ASCL5Q7RTU5 278 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SPNS2Q8IVW8 549 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR1F12Q8NHA8 337 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 GHITMQ9H3K2 345 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 NUP205Q92621 2012 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 MBLAC1A4D2B0 266 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 PCMT1P22061 227 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 LIM2P55344 173 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 FNDC7Q5VTL7 733 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 NUBPLQ8TB37 319 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR6C1Q96RD1 312 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 TBX15Q96SF7 602 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 NRIP2Q9BQI9 281 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 OR2D2Q9H210 308 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 LANCL2Q9NS86 450 aa4.89□□□□□ -1.63
XRN1-201ENST00000264951 SOX21Q9Y651 276 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.89□□□□□ -1.63
XRN1-201ENST00000264951 SPTBP11277 2137 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms