RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DEGS2Q6QHC5 323 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 DTX1Q86Y01 620 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 NECAP1Q8NC96 275 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 ZMAT5Q9UDW3 170 aaKnown RBP10.47□□□□□ -0.73
USHBP1-201ENST00000252597 MTCH2Q9Y6C9 303 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 IGHV1OR21-1A0A087WYE8 117 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 LOC390937A0A1W2PQ73 354 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 DBX1A6NMT0 343 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 CNOT4O95628 575 aaKnown RBP10.47□□□□□ -0.73
USHBP1-201ENST00000252597 OPN5Q6U736 354 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 VASH2Q86V25 355 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 STX12Q86Y82 276 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 SMRP1Q8NCR6 262 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 SAT2Q96F10 170 aaPredicted RBP10.47□□□□□ -0.73
USHBP1-201ENST00000252597 B3GAT1Q9P2W7 334 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 TRAV39A0A0B4J263 110 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 BLACEA4D250 179 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 CYB5BO43169 146 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ST8SIA3O43173 380 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 FCGR3AP08637 254 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 FASLGP48023 281 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 CFHR1Q03591 330 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.73
USHBP1-201ENST00000252597 VAX1Q5SQQ9 334 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 LCN15Q6UWW0 184 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 NAT6Q93015 286 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 PBDC1Q9BVG4 233 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 TMEM100Q9NV29 134 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ANXA10Q9UJ72 324 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ARHGAP21Q5T5U3 1957 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 IFNA17P01571 189 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF17P17021 662 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 HLA-GP17693 338 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 GABRA4P48169 554 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 SRYQ05066 204 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF774Q6NX45 483 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 YRDCQ86U90 279 aaKnown RBP10.46□□□□□ -0.73
USHBP1-201ENST00000252597 GPR137CQ8N3F9 429 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 PTX4Q96A99 478 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 SUCNR1Q9BXA5 334 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 GNG13Q9P2W3 67 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 ST3GAL6Q9Y274 331 aa10.46□□□□□ -0.73
USHBP1-201ENST00000252597 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 CACNA1HO95180 2353 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 EDN3P14138 238 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 CHATP28329 748 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 HTR5AP47898 357 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF84P51523 738 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 AFF3P51826 1226 aaKnown RBP10.46□□□□□ -0.74
USHBP1-201ENST00000252597 RAB11AP62491 216 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 SLC35A1P78382 337 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 PLCXD3Q63HM9 321 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF251Q9BRH9 671 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 METTL9Q9H1A3 318 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 LIME1Q9H400 295 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 OSGIN2Q9Y236 505 aa10.46□□□□□ -0.74
USHBP1-201ENST00000252597 IGKV3D-11A0A0A0MRZ8 115 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 NSG1A0A0A6YYJ2 146 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 DEDDO75618 318 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 ECH1Q13011 328 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 PHYHD1Q5SRE7 291 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 C15orf54Q8N8G6 183 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 MARS2Q96GW9 593 aaKnown RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 SLC2A9Q9NRM0 540 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 DKKL1Q9UK85 242 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 NKX2-6A6NCS4 301 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 FIGNL2A6NMB9 653 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 E5RGE8 158 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 TNFSF11O14788 317 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 TAAR5O14804 337 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 PGA4P0DJD7 388 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 PGA3P0DJD8 388 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 SKA3Q8IX90 412 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 HAS2Q92819 552 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 LYZL4Q96KX0 146 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 THADAQ6YHU6 1953 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 TRAF3IP2O43734 574 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 FOSL2P15408 326 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 MSR1P21757 451 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 CXorf66Q5JRM2 361 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 GJC3Q8NFK1 279 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 OR1J1Q8NGS3 322 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 SGCZQ96LD1 299 aa10.45□□□□□ -0.74
USHBP1-201ENST00000252597 C1orf147Q96MC9 270 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-201ENST00000252597 TOLLIPQ9H0E2 274 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms