RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CCL4P13236 92 aa8.81□□□□□ -1
COPB1-201ENST00000249923 MSR1P21757 451 aa8.81□□□□□ -1
COPB1-201ENST00000249923 BLVRBP30043 206 aaPredicted RBP8.81□□□□□ -1
COPB1-201ENST00000249923 LSM6P62312 80 aaKnown RBP8.81□□□□□ -1
COPB1-201ENST00000249923 ECH1Q13011 328 aa8.81□□□□□ -1
COPB1-201ENST00000249923 HAGHQ16775 308 aa8.81□□□□□ -1
COPB1-201ENST00000249923 PNLIPRP3Q17RR3 467 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ABCA11PQ4W5N1 156 aa8.81□□□□□ -1
COPB1-201ENST00000249923 TSPO2Q5TGU0 170 aa8.81□□□□□ -1
COPB1-201ENST00000249923 OR2A2Q6IF42 318 aa8.81□□□□□ -1
COPB1-201ENST00000249923 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
COPB1-201ENST00000249923 OR8U1Q8NH10 309 aa8.81□□□□□ -1
COPB1-201ENST00000249923 TM2D1Q9BX74 207 aa8.81□□□□□ -1
COPB1-201ENST00000249923 SLC5A7Q9GZV3 580 aa8.81□□□□□ -1
COPB1-201ENST00000249923 PIGLQ9Y2B2 252 aa8.81□□□□□ -1
COPB1-201ENST00000249923 HS3ST3B1Q9Y662 390 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ANGPTL7O43827 346 aa8.81□□□□□ -1
COPB1-201ENST00000249923 LIFP15018 202 aa8.81□□□□□ -1
COPB1-201ENST00000249923 GRB2P62993 217 aaKnown RBP8.81□□□□□ -1
COPB1-201ENST00000249923 OR9K2Q8NGE7 335 aa8.81□□□□□ -1
COPB1-201ENST00000249923 MARS2Q96GW9 593 aaKnown RBP8.81□□□□□ -1
COPB1-201ENST00000249923 PGAM5Q96HS1 289 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ZNF160Q9HCG1 818 aa8.81□□□□□ -1
COPB1-201ENST00000249923 RAB18Q9NP72 206 aa8.81□□□□□ -1
COPB1-201ENST00000249923 GSN-AS1Q9NRJ2 163 aa8.81□□□□□ -1
COPB1-201ENST00000249923 C14orf166Q9Y224 244 aaKnown RBP8.81□□□□□ -1
COPB1-201ENST00000249923 SMG1Q96Q15 3661 aaKnown RBP8.81□□□□□ -1
COPB1-201ENST00000249923 A0A0U1RQV5 110 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ZNF726A6NNF4 738 aa8.81□□□□□ -1
COPB1-201ENST00000249923 UMAD1C9J7I0 102 aa8.81□□□□□ -1
COPB1-201ENST00000249923 TNFSF11O14788 317 aa8.81□□□□□ -1
COPB1-201ENST00000249923 IFNA21P01568 189 aa8.81□□□□□ -1
COPB1-201ENST00000249923 PATE4P0C8F1 98 aa8.81□□□□□ -1
COPB1-201ENST00000249923 FCGR2AP12318 317 aa8.81□□□□□ -1
COPB1-201ENST00000249923 CRYGSP22914 178 aa8.81□□□□□ -1
COPB1-201ENST00000249923 PTAFRP25105 342 aa8.81□□□□□ -1
COPB1-201ENST00000249923 RRADP55042 308 aa8.81□□□□□ -1
COPB1-201ENST00000249923 SLC35A1P78382 337 aa8.81□□□□□ -1
COPB1-201ENST00000249923 HLA-BQ31612 363 aa8.81□□□□□ -1
COPB1-201ENST00000249923 AWAT1Q58HT5 328 aa8.81□□□□□ -1
COPB1-201ENST00000249923 C10orf91Q5T1B1 145 aa8.81□□□□□ -1
COPB1-201ENST00000249923 NEK7Q8TDX7 302 aa8.81□□□□□ -1
COPB1-201ENST00000249923 SLC25A43Q8WUT9 341 aaPredicted RBP8.81□□□□□ -1
COPB1-201ENST00000249923 HAS2Q92819 552 aa8.81□□□□□ -1
COPB1-201ENST00000249923 DOCK7Q96N67 2140 aa8.8□□□□□ -1
COPB1-201ENST00000249923 ICE1Q9Y2F5 2266 aa8.8□□□□□ -1
COPB1-201ENST00000249923 ZNF727A8MUV8 499 aa8.8□□□□□ -1
COPB1-201ENST00000249923 GPR37O15354 613 aa8.8□□□□□ -1
COPB1-201ENST00000249923 RNF224P0DH78 156 aa8.8□□□□□ -1
COPB1-201ENST00000249923 CSNK1A1P48729 337 aa8.8□□□□□ -1
COPB1-201ENST00000249923 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
COPB1-201ENST00000249923 C21orf62-AS1Q17RA5 79 aa8.8□□□□□ -1
COPB1-201ENST00000249923 MIDNQ504T8 468 aa8.8□□□□□ -1
COPB1-201ENST00000249923 PRSS54Q6PEW0 395 aa8.8□□□□□ -1
COPB1-201ENST00000249923 Q7L0L9 218 aa8.8□□□□□ -1
COPB1-201ENST00000249923 SSX9Q7RTT3 188 aa8.8□□□□□ -1
COPB1-201ENST00000249923 C20orf196Q8IYI0 205 aa8.8□□□□□ -1
COPB1-201ENST00000249923 FGFBP3Q8TAT2 258 aa8.8□□□□□ -1
COPB1-201ENST00000249923 KIRREL1Q96J84 757 aa8.8□□□□□ -1
COPB1-201ENST00000249923 Q96M66 194 aa8.8□□□□□ -1
COPB1-201ENST00000249923 AQP10Q96PS8 301 aa8.8□□□□□ -1
COPB1-201ENST00000249923 WNT16Q9UBV4 365 aa8.8□□□□□ -1
COPB1-201ENST00000249923 MRPS17Q9Y2R5 130 aaKnown RBP8.8□□□□□ -1
COPB1-201ENST00000249923 ZNF318Q5VUA4 2279 aa8.8□□□□□ -1
COPB1-201ENST00000249923 BOD1L1Q8NFC6 3051 aa8.8□□□□□ -1
COPB1-201ENST00000249923 IGKV1-12A0A0C4DH73 117 aa8.8□□□□□ -1
COPB1-201ENST00000249923 C9JQL5 133 aa8.8□□□□□ -1
COPB1-201ENST00000249923 ZNHIT1O43257 154 aa8.8□□□□□ -1
COPB1-201ENST00000249923 SPRY1O43609 319 aaPredicted RBP8.8□□□□□ -1
COPB1-201ENST00000249923 IGKV1D-12P01611 117 aa8.8□□□□□ -1
COPB1-201ENST00000249923 ZNF708P17019 499 aa8.8□□□□□ -1
COPB1-201ENST00000249923 FCGR2CP31995 323 aa8.8□□□□□ -1
COPB1-201ENST00000249923 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
COPB1-201ENST00000249923 LPAR6P43657 344 aa8.8□□□□□ -1
COPB1-201ENST00000249923 CXCL12P48061 93 aa8.8□□□□□ -1
COPB1-201ENST00000249923 B3GALT5-AS1P59052 145 aa8.8□□□□□ -1
COPB1-201ENST00000249923 TAS2R31P59538 309 aa8.8□□□□□ -1
COPB1-201ENST00000249923 RPUSD3Q6P087 351 aaKnown RBP8.8□□□□□ -1
COPB1-201ENST00000249923 TMEM182Q6ZP80 229 aaPredicted RBP8.8□□□□□ -1
COPB1-201ENST00000249923 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
COPB1-201ENST00000249923 BSCL2Q96G97 398 aaPredicted RBP8.8□□□□□ -1
COPB1-201ENST00000249923 ANGPTL4Q9BY76 406 aa8.8□□□□□ -1
COPB1-201ENST00000249923 GPR173Q9NS66 373 aa8.8□□□□□ -1
COPB1-201ENST00000249923 CSTBP04080 98 aaKnown RBP8.79□□□□□ -1
COPB1-201ENST00000249923 CLDN15P56746 228 aa8.79□□□□□ -1
COPB1-201ENST00000249923 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.79□□□□□ -1
COPB1-201ENST00000249923 UBAC2Q8NBM4 344 aa8.79□□□□□ -1
COPB1-201ENST00000249923 POM121Q96HA1 1249 aa8.79□□□□□ -1
COPB1-201ENST00000249923 MEGF10Q96KG7 1140 aa8.79□□□□□ -1
COPB1-201ENST00000249923 NRIP2Q9BQI9 281 aa8.79□□□□□ -1
COPB1-201ENST00000249923 RBM24Q9BX46 236 aaKnown RBP8.79□□□□□ -1
COPB1-201ENST00000249923 A0A1W2PR80 420 aa8.79□□□□□ -1
COPB1-201ENST00000249923 PATE3B3GLJ2 98 aa8.79□□□□□ -1
COPB1-201ENST00000249923 M0R135 149 aa8.79□□□□□ -1
COPB1-201ENST00000249923 HSPB6O14558 160 aa8.79□□□□□ -1
COPB1-201ENST00000249923 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
COPB1-201ENST00000249923 FGF5P12034 268 aa8.79□□□□□ -1
COPB1-201ENST00000249923 THBS4P35443 961 aa8.79□□□□□ -1
COPB1-201ENST00000249923 NAAAQ02083 359 aa8.79□□□□□ -1
COPB1-201ENST00000249923 RAET1LQ5VY80 246 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms