RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mapk3Q63844 380 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Stoml3Q6PE84 287 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 PigmQ8C2R7 423 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rae1Q8C570 368 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc35a3Q8R1T4 326 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc6a8Q8VBW1 640 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tmem205Q91XE8 189 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rab4bQ91ZR1 213 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 FrkQ922K9 512 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 CrtapQ9CYD3 400 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Upk1aQ9D132 257 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tmem126bQ9D1R1 230 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mbnl1Q9JKP5 341 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gabrg1Q9R0Y8 465 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zfp462B1AWL2 2495 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1471F6QVZ8 314 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pcdh12O55134 1180 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pdlim3O70209 316 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Atp1b1P14094 304 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Acp2P24638 423 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Capza1P47753 286 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 StsP50427 624 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ccl9P51670 122 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rac3P60764 192 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 EbpP70245 230 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gal3st2cQ3ULK5 396 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vezf1Q5SXC4 518 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 HlxQ61670 476 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1031Q7TR87 336 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Scml4Q80VG1 408 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Lax1Q8BHB3 407 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc25a1Q8JZU2 311 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Krt33aQ8K0Y2 404 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Nsun5Q8K4F6 465 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Znhit1Q8R331 154 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Wdr77Q99J09 342 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Nop16Q9CPT5 178 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Eef1akmt1Q9CY45 214 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tmem239Q9DA47 151 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r48Q9EQ52 302 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Psma1Q9R1P4 263 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tagln2Q9WVA4 199 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm19410A0A140LJC7 2098 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1124A2AT86 318 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Znf551B2RUI1 696 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 4930467E23RikD3Z1P8 350 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr750E9Q0Z1 331 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm15319E9Q637 350 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 G530012D18RikJ3QK25 139 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Csn1s2bP02664 143 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Csn2P10598 231 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Itga5P11688 1053 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Il5raP21183 415 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Stfa1P35175 97 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rpl18P35980 188 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mapk14P47811 360 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fam173aQ501J2 229 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Spock1Q62288 442 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm21093Q6GQS8 569 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Adat3Q6PAT0 349 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Prss43Q76HL1 382 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc35f2Q7TML3 375 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm21119Q8C646 350 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mboat2Q8R3I2 519 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1388Q8VFA3 311 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr771Q8VFH6 317 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr836Q8VFJ3 317 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mrpl41Q9CQN7 135 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pip4p2Q9CZX7 257 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tssk4Q9D411 328 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Bola1Q9D8S9 137 aaKnown RBP6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Smim23Q9DAL0 136 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr44Q9EQB8 314 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sema7aQ9QUR8 664 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Exo1Q9QZ11 837 aa6.11□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Igkv6-14A0A140T8P1 115 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 PvrigA0A1B0GS01 234 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fam90a1aA2A4E2 429 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Scgb1b30A2BH64 92 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc22a28B2RT89 552 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm6034E9Q101 117 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gpr31F8VQN3 319 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm19684G3UZ45 117 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 P01667 111 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cd82P40237 266 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 InmtP40936 264 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 BidP70444 195 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 AmbpQ07456 349 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc17a4Q5NCM1 492 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr776Q7TRI3 312 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 DgkzQ80UP3 929 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sh3bgrl2Q8BG73 107 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tacstd2Q8BGV3 317 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Nhlrc2Q8BZW8 725 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gykl1Q8C635 549 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r231Q8R2A3 311 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Chrnb4Q8R493 495 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 GcaQ8VC88 220 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 B3gnt9Q8VI16 399 aa6.1□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc39a8Q91W10 462 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms