RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 LRRC39Q96DD0 335 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 DERL3Q96Q80 235 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CIB1Q99828 191 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 UTP23Q9BRU9 249 aaKnown RBP1.36□□□□□ -2.19
CHD2-203ENST00000625243 SIGLEC1Q9BZZ2 1709 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 SLC38A1Q9H2H9 487 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 PLEKHF2Q9H8W4 249 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 OR2S2Q9NQN1 319 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 DIABLOQ9NR28 239 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 SDHAF3Q9NRP4 125 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 WIF1Q9Y5W5 379 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 SLC22A7Q9Y694 548 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 LAMC3Q9Y6N6 1575 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 IQSEC2Q5JU85 1478 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 ELP1O95163 1332 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 ARHGAP21Q5T5U3 1957 aa1.36□□□□□ -2.19
CHD2-203ENST00000625243 CHD1O14646 1710 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 TRAV8-7A0A075B6U6 113 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 IGKV2-24A0A0C4DH68 120 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 IGKV1-6A0A0C4DH72 117 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SLC5A10A0PJK1 596 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 GMNCA6NCL1 334 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 RNF113AO15541 343 aaKnown RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 KDELR3O43731 214 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SPOPO43791 374 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 GMDSO60547 372 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 CNMDO75829 334 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 ZMPSTE24O75844 475 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 CD5P06127 495 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 GIMD1P0DJR0 217 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 RNASE2P10153 161 aaKnown RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 CD28P10747 220 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 LIPCP11150 499 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 TAC1P20366 129 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 BGNP21810 368 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 CPN2P22792 545 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 TGFBR1P36897 503 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 RANBP1P43487 201 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 TUFMP49411 452 aaKnown RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 XKP51811 444 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SLC18A1P54219 525 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 CARD18P57730 90 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 OR12D2P58182 307 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 RBX1P62877 108 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 STX4Q12846 297 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 BNIP2Q12982 314 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 PMVKQ15126 192 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 ELOCQ15369 112 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 APOBEC3HQ6NTF7 200 aaKnown RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 USP50Q70EL3 339 aaPredicted RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 PID1Q7Z2X4 250 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 CYP4Z1Q86W10 505 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 LRRC8AQ8IWT6 810 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 OR51Q1Q8NH59 317 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 NELFBQ8WX92 580 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 MSANTD3Q96H12 275 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 GLT1D1Q96MS3 346 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SEC22CQ9BRL7 303 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SIKE1Q9BRV8 207 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 THTPAQ9BU02 230 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 MAP1LC3CQ9BXW4 147 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 PORCNQ9H237 461 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 PRORYQ9H606 182 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 C12orf4Q9NQ89 552 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 NLE1Q9NVX2 485 aaPredicted RBP1.35□□□□□ -2.19
CHD2-203ENST00000625243 TAC3Q9UHF0 121 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 ANXA10Q9UJ72 324 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 TRAPPC1Q9Y5R8 145 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 INSIG2Q9Y5U4 225 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 ZNF780BQ9Y6R6 833 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 GAPVD1Q14C86 1478 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 SCN2AQ99250 2005 aa1.35□□□□□ -2.19
CHD2-203ENST00000625243 KIR2DS1A0A191URI9 304 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 CD300LBA8K4G0 201 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 C16orf90A8MZG2 172 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 K7EM74 188 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 M0R1B8 84 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 NDUFS8O00217 210 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 COX7A2P2O60397 106 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 OR2A4O95047 310 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 IGKV1-39P01597 117 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 IGHV1-46P01743 117 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 APOA1P02647 267 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 IGKV1D-39P04432 117 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 IGKV4-1P06312 121 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 CD9P21926 228 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 PAX6P26367 422 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 TGM4P49221 684 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 CCL23P55773 120 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 TNNC1P63316 161 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 NDUFAF6Q330K2 333 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 UBE2NLQ5JXB2 153 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 CLEC12AQ5QGZ9 265 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 FAM104BQ5XKR9 115 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 KCTD16Q68DU8 428 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 C16orf87Q6PH81 154 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 EPGNQ6UW88 154 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 CLEC19AQ6UXS0 136 aa1.34□□□□□ -2.19
CHD2-203ENST00000625243 C16orf47Q6ZP98 133 aaPredicted RBP1.34□□□□□ -2.19
CHD2-203ENST00000625243 SSX6Q7RTT6 188 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms