RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CLEC2LP0C7M8 214 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 KIR2DL2P43627 348 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 AKIRIN2Q53H80 203 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 C12orf73Q69YU5 71 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 GLCCI1Q86VQ1 547 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 PHC2Q8IXK0 858 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ZFAND1Q8TCF1 268 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 STARD4Q96DR4 205 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 FYTTD1Q96QD9 318 aaKnown RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 NPAS1Q99742 590 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 RNF122Q9H9V4 155 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ADGRL4Q9HBW9 690 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 PKD1L2Q7Z442 2459 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 IFNA10P01566 189 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 CSF1P09603 554 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 AKAIN1P0CW23 69 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF728P0DKX0 622 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LCN2P80188 198 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 STUMQ69YW2 141 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 Q71RC1 249 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 TPRX1Q8N7U7 411 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 OR10AC1Q8NH08 325 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 NEU4Q8WWR8 484 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 SGK3Q96BR1 496 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF488Q96MN9 340 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 PRRT1Q99946 306 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 COL4A3Q01955 1670 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 INMT-MINDY4F8WBC2 141 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LYNX1G3V0Z9 82 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 M0R1X1 148 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 SDCBPO00560 298 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 SS18L1O75177 396 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 HOXB5P09067 269 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LYNX1P0DP58 116 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 OR3A1P47881 315 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 HOXA1P49639 335 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LUMP51884 338 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 TAS2R19P59542 299 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 SLC25A47Q6Q0C1 308 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LILRB2Q8N423 598 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 C1orf162Q8NEQ5 155 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 NUDCD2Q8WVJ2 157 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 RNF133Q8WVZ7 376 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 TM4SF5O14894 197 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 IL1AP01583 271 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 RPS4Y1P22090 263 aaKnown RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 PTGFRP43088 359 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 MTNR1BP49286 362 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 ERVS71-1P61550 626 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 RAB31Q13636 194 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 MEF2DQ14814 521 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 TESK1Q15569 626 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 GABRA6Q16445 453 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 NHLRC1Q6VVB1 395 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 OR8G5Q8NG78 346 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 LINC00470Q9BZP3 86 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 C12orf4Q9NQ89 552 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF275Q9NSD4 429 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-229ENST00000622668 CBLN4Q9NTU7 201 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 NLKQ9UBE8 527 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 NPTNQ9Y639 398 aa7.88□□□□□ -1.15
HDAC9-229ENST00000622668 TRBV23-1A0A0A0MS06 115 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 TRDV1A0A1B0GX56 115 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 M0QZ24 198 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 PMP2P02689 132 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 CELA3BP08861 270 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 CTXN2P0C2S0 81 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 GK2Q14410 553 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 SLC9A3R2Q15599 337 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 CDH24Q86UP0 819 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 OR5A2Q8NGI9 324 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 GATA6Q92908 595 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 PLEKHF2Q9H8W4 249 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 MRM2Q9UI43 246 aaKnown RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 LSM5Q9Y4Y9 91 aaKnown RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 USP9YO00507 2555 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 CTDSP2O14595 271 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 PHF1O43189 567 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 LPCAT3Q6P1A2 487 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 CD300LDQ6UXZ3 194 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 OR13D1Q8NGV5 346 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 PRDM14Q9GZV8 571 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 NECAP2Q9NVZ3 263 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 PTTG2Q9NZH5 202 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 TRAV39A0A0B4J263 110 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 OR2AT4A6NND4 320 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 GMDSO60547 372 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 HAND1O96004 215 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 IFNA2P01563 188 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 GAAP10253 952 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 MRPS10P82664 201 aaKnown RBP7.87□□□□□ -1.15
HDAC9-229ENST00000622668 C2orf76Q3KRA6 126 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 AADACL4Q5VUY2 407 aa7.87□□□□□ -1.15
HDAC9-229ENST00000622668 LRRC28Q86X40 367 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms