RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 S100A13Q99584 98 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 CCL19Q99731 98 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 EGLN1Q9GZT9 426 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 NXF2Q9GZY0 626 aaKnown RBP13.11□□□□□ -0.31
CCL3-206ENST00000614051 BANF2Q9H503 90 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 FN3KRPQ9HA64 309 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 SMURF1Q9HCE7 757 aa13.11□□□□□ -0.31
CCL3-206ENST00000614051 CTDSP2O14595 271 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 WNT9BO14905 357 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 HTR3BO95264 441 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 BPNT1O95861 308 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 BMP4P12644 408 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 EGR1P18146 543 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 SERPINA2P20848 420 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 EFNB2P52799 333 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 QRFPP83859 136 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 UNC119Q13432 240 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 RSU1Q15404 277 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 ZNF404Q494X3 552 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 BOLLQ8N9W6 283 aaKnown RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 TMEM104Q8NE00 496 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 LRRC29Q8WV35 223 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 ABRACLQ9P1F3 81 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 PPP1R3CQ9UQK1 317 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 H7C417 338 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 OVOL3O00110 214 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 LDLRAD4O15165 306 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 HPGDSO60760 199 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 CYB5AP00167 134 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 CYB5R3P00387 301 aaPredicted RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 COL8A2P25067 703 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 BMXP51813 675 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 BIVMQ86UB2 503 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 SAXO1Q8IYX7 474 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 AP3S1Q92572 193 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 SEH1LQ96EE3 360 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 CEP19Q96LK0 163 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 WDR13Q9H1Z4 485 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 PTTG2Q9NZH5 202 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 IL36RNQ9UBH0 155 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
CCL3-206ENST00000614051 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
CCL3-206ENST00000614051 APCP25054 2843 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 A0A075B6Q4 140 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
CCL3-206ENST00000614051 KDM4BO94953 1096 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 ZNF205O95201 554 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 MPIG6BO95866 241 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 SNU13P55769 128 aaKnown RBP13.09□□□□□ -0.31
CCL3-206ENST00000614051 SAMD12Q8N8I0 201 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 DTX3Q8N9I9 347 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 POC1AQ8NBT0 407 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 C19orf18Q8NEA5 215 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 CCL17Q92583 94 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 SLC25A38Q96DW6 304 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 NRIP2Q9BQI9 281 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 MIXL1Q9H2W2 232 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 SPATA2Q9UM82 520 aa13.09□□□□□ -0.31
CCL3-206ENST00000614051 SPG11Q96JI7 2443 aa13.08□□□□□ -0.31
CCL3-206ENST00000614051 RGS5O15539 181 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 UBBP0CG47 229 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 ERVK11-1P61568 191 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 LAX1Q8IWV1 398 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 GCSAMQ8N6F7 178 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 Q8TCH9 128 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 NEU4Q8WWR8 484 aaPredicted RBP13.08□□□□□ -0.32
CCL3-206ENST00000614051 MMP27Q9H306 513 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 IL36GQ9NZH8 169 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 RNF7Q9UBF6 113 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
CCL3-206ENST00000614051 IGHV3OR15-7A0A075B7D8 119 aa13.07□□□□□ -0.32
CCL3-206ENST00000614051 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
CCL3-206ENST00000614051 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
CCL3-206ENST00000614051 CLPXO76031 633 aa13.07□□□□□ -0.32
CCL3-206ENST00000614051 NXPH2O95156 264 aa13.07□□□□□ -0.32
CCL3-206ENST00000614051 LHBP01229 141 aa13.07□□□□□ -0.32
CCL3-206ENST00000614051 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
CCL3-206ENST00000614051 TFF1P04155 84 aa13.07□□□□□ -0.32
CCL3-206ENST00000614051 EIF4EP06730 217 aaKnown RBP13.07□□□□□ -0.32
CCL3-206ENST00000614051 DAOP14920 347 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms