RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
RPS28-203ENST00000600659 CD276Q5ZPR3 534 aa13□□□□□ -0.33
RPS28-203ENST00000600659 ZNF529Q6P280 563 aa13□□□□□ -0.33
RPS28-203ENST00000600659 PHC2Q8IXK0 858 aa13□□□□□ -0.33
RPS28-203ENST00000600659 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
RPS28-203ENST00000600659 PARP16Q8N5Y8 322 aa13□□□□□ -0.33
RPS28-203ENST00000600659 OR13C3Q8NGS6 347 aa13□□□□□ -0.33
RPS28-203ENST00000600659 OR52N1Q8NH53 320 aa13□□□□□ -0.33
RPS28-203ENST00000600659 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
RPS28-203ENST00000600659 HAVCR2Q8TDQ0 301 aa13□□□□□ -0.33
RPS28-203ENST00000600659 C22orf15Q8WYQ4 148 aa13□□□□□ -0.33
RPS28-203ENST00000600659 BORCS8Q96FH0 119 aa13□□□□□ -0.33
RPS28-203ENST00000600659 MYCBPQ99417 103 aaPredicted RBP13□□□□□ -0.33
RPS28-203ENST00000600659 SLC6A7Q99884 636 aa13□□□□□ -0.33
RPS28-203ENST00000600659 DCTN5Q9BTE1 182 aa13□□□□□ -0.33
RPS28-203ENST00000600659 NUP50Q9UKX7 468 aa13□□□□□ -0.33
RPS28-203ENST00000600659 SLC7A11Q9UPY5 501 aa13□□□□□ -0.33
RPS28-203ENST00000600659 SOX21Q9Y651 276 aaPredicted RBP13□□□□□ -0.33
RPS28-203ENST00000600659 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 TRBV2A0A0J9YWF9 115 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 ZNF879B4DU55 563 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 ECDO95905 644 aaPredicted RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 ZNF20P17024 532 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 CAV3P56539 151 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 IL13RA1P78552 427 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 SMIM21Q3B7S5 101 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 CCDC58Q4VC31 144 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 AHSA2Q719I0 299 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 ZNRF1Q8ND25 227 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 OR13C9Q8NGT0 318 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 SGCDQ92629 289 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 PGLYRP3Q96LB9 341 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 ZNF48Q96MX3 618 aaPredicted RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 ELL3Q9HB65 397 aaPredicted RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 PAK1IP1Q9NWT1 392 aaPredicted RBP12.99□□□□□ -0.33
RPS28-203ENST00000600659 BABAM2Q9NXR7 383 aa12.99□□□□□ -0.33
RPS28-203ENST00000600659 IGHV3OR16-10A0A075B7F0 116 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 IGKV1-12A0A0C4DH73 117 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 EFCAB10A6NFE3 127 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SLC1A7O00341 560 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 NDUFB3O43676 98 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 TCF21O43680 179 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 RGS9O75916 674 aaPredicted RBP12.98□□□□□ -0.33
RPS28-203ENST00000600659 ALX3O95076 343 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SERPINA3P01011 423 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 IGKV1D-12P01611 117 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 GABRA2P47869 451 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 RBP2P50120 134 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 HILS1P60008 231 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 RPS11P62280 158 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPS28-203ENST00000600659 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 C9orf139Q6ZV77 190 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 USP43Q70EL4 1123 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 BPIFB6Q8NFQ5 453 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 GATAD2BQ8WXI9 593 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SLAMF9Q96A28 289 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 OPALINQ96PE5 141 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 COMMD4Q9H0A8 199 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 ZCCHC4Q9H5U6 513 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 IL36RNQ9UBH0 155 aa12.98□□□□□ -0.33
RPS28-203ENST00000600659 SLC25A10Q9UBX3 287 aaPredicted RBP12.98□□□□□ -0.33
RPS28-203ENST00000600659 GPR37O15354 613 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 NXPH2O95156 264 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 KNG1P01042 644 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 LIPFP07098 398 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 MYL12AP19105 171 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 NPBWR2P48146 333 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 ZP1P60852 638 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 RIPK1Q13546 671 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 LRRC10Q5BKY1 277 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 LHFPL2Q6ZUX7 228 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 Q8N7P7 452 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
RPS28-203ENST00000600659 OR51A2Q8NGJ7 313 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 OR13C5Q8NGS8 318 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 MED30Q96HR3 178 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 CEP19Q96LK0 163 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 C1orf147Q96MC9 270 aaPredicted RBP12.97□□□□□ -0.33
RPS28-203ENST00000600659 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 ANK2Q01484 3957 aa12.97□□□□□ -0.33
RPS28-203ENST00000600659 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 RNF212BA8MTL3 300 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 SPRY1O43609 319 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms