RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DACT3Q96B18 629 aaPredicted RBP8.82□□□□□ -1
LIG1-210ENST00000596332 BORCS8Q96FH0 119 aa8.82□□□□□ -1
LIG1-210ENST00000596332 OR51E2Q9H255 320 aa8.82□□□□□ -1
LIG1-210ENST00000596332 RNF167Q9H6Y7 350 aa8.82□□□□□ -1
LIG1-210ENST00000596332 PATZ1Q9HBE1 687 aaKnown RBP8.82□□□□□ -1
LIG1-210ENST00000596332 IL36RNQ9UBH0 155 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SLC7A11Q9UPY5 501 aa8.82□□□□□ -1
LIG1-210ENST00000596332 OOEPA6NGQ2 149 aa8.81□□□□□ -1
LIG1-210ENST00000596332 A6NLC8 198 aa8.81□□□□□ -1
LIG1-210ENST00000596332 CEACAM18A8MTB9 384 aa8.81□□□□□ -1
LIG1-210ENST00000596332 RGS9O75916 674 aaPredicted RBP8.81□□□□□ -1
LIG1-210ENST00000596332 KDM4BO94953 1096 aa8.81□□□□□ -1
LIG1-210ENST00000596332 IGHV4-31P0DP07 118 aa8.81□□□□□ -1
LIG1-210ENST00000596332 PSG2P11465 335 aa8.81□□□□□ -1
LIG1-210ENST00000596332 GALP22466 123 aa8.81□□□□□ -1
LIG1-210ENST00000596332 BDKRB2P30411 391 aa8.81□□□□□ -1
LIG1-210ENST00000596332 FGF9P31371 208 aaPredicted RBP8.81□□□□□ -1
LIG1-210ENST00000596332 MDH2P40926 338 aaKnown RBP8.81□□□□□ -1
LIG1-210ENST00000596332 OR3A4PP47883 348 aa8.81□□□□□ -1
LIG1-210ENST00000596332 TMEM249Q2WGJ8 235 aa8.81□□□□□ -1
LIG1-210ENST00000596332 C1orf100Q5SVJ3 147 aa8.81□□□□□ -1
LIG1-210ENST00000596332 ACP7Q6ZNF0 438 aa8.81□□□□□ -1
LIG1-210ENST00000596332 LHFPL2Q6ZUX7 228 aa8.81□□□□□ -1
LIG1-210ENST00000596332 BATF2Q8N1L9 274 aa8.81□□□□□ -1
LIG1-210ENST00000596332 OR5T2Q8NGG2 359 aa8.81□□□□□ -1
LIG1-210ENST00000596332 OR4D6Q8NGJ1 314 aa8.81□□□□□ -1
LIG1-210ENST00000596332 OR5D18Q8NGL1 313 aa8.81□□□□□ -1
LIG1-210ENST00000596332 OR13F1Q8NGS4 319 aa8.81□□□□□ -1
LIG1-210ENST00000596332 OR11L1Q8NGX0 322 aa8.81□□□□□ -1
LIG1-210ENST00000596332 PHYHIPQ92561 330 aa8.81□□□□□ -1
LIG1-210ENST00000596332 RAB1CQ92928 201 aa8.81□□□□□ -1
LIG1-210ENST00000596332 CYYR1Q96J86 154 aa8.81□□□□□ -1
LIG1-210ENST00000596332 C18orf12Q96KH6 178 aa8.81□□□□□ -1
LIG1-210ENST00000596332 GSX1Q9H4S2 264 aaPredicted RBP8.81□□□□□ -1
LIG1-210ENST00000596332 NARFLQ9H6Q4 476 aa8.81□□□□□ -1
LIG1-210ENST00000596332 CNTD2Q9H8S5 307 aa8.81□□□□□ -1
LIG1-210ENST00000596332 TMEM138Q9NPI0 162 aa8.81□□□□□ -1
LIG1-210ENST00000596332 KAAG1Q9UBP8 84 aa8.81□□□□□ -1
LIG1-210ENST00000596332 MAB21L2Q9Y586 359 aa8.81□□□□□ -1
LIG1-210ENST00000596332 SVEP1Q4LDE5 3571 aa8.81□□□□□ -1
LIG1-210ENST00000596332 F8P00451 2351 aa8.8□□□□□ -1
LIG1-210ENST00000596332 ANK3Q12955 4377 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 A0A0G2JK05 382 aa8.8□□□□□ -1
LIG1-210ENST00000596332 LRRC30A6NM36 301 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SMAD7O15105 426 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 GYPAP02724 150 aa8.8□□□□□ -1
LIG1-210ENST00000596332 MAS1P04201 325 aa8.8□□□□□ -1
LIG1-210ENST00000596332 CD2P06729 351 aa8.8□□□□□ -1
LIG1-210ENST00000596332 CALCBP10092 127 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SELLP14151 372 aa8.8□□□□□ -1
LIG1-210ENST00000596332 CD99P14209 185 aa8.8□□□□□ -1
LIG1-210ENST00000596332 FOSL1P15407 271 aa8.8□□□□□ -1
LIG1-210ENST00000596332 MUC1P15941 1255 aaPredicted RBP8.8□□□□□ -1
LIG1-210ENST00000596332 BCL3P20749 454 aa8.8□□□□□ -1
LIG1-210ENST00000596332 GADD45AP24522 165 aa8.8□□□□□ -1
LIG1-210ENST00000596332 PSMA1P25786 263 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 TGFBR1P36897 503 aa8.8□□□□□ -1
LIG1-210ENST00000596332 PTGFRP43088 359 aa8.8□□□□□ -1
LIG1-210ENST00000596332 TRAM1Q15629 374 aa8.8□□□□□ -1
LIG1-210ENST00000596332 ZNF788Q6ZQV5 615 aa8.8□□□□□ -1
LIG1-210ENST00000596332 CDH26Q8IXH8 852 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SAXO1Q8IYX7 474 aa8.8□□□□□ -1
LIG1-210ENST00000596332 BOLLQ8N9W6 283 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 PXT1Q8NFP0 134 aa8.8□□□□□ -1
LIG1-210ENST00000596332 OR51F2Q8NH61 342 aa8.8□□□□□ -1
LIG1-210ENST00000596332 ZNF671Q8TAW3 534 aa8.8□□□□□ -1
LIG1-210ENST00000596332 HPS1Q92902 700 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SLAMF9Q96A28 289 aa8.8□□□□□ -1
LIG1-210ENST00000596332 MSI2Q96DH6 328 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 ZNF665Q9H7R5 613 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SEBOXQ9HB31 216 aaPredicted RBP8.8□□□□□ -1
LIG1-210ENST00000596332 SMURF1Q9HCE7 757 aa8.8□□□□□ -1
LIG1-210ENST00000596332 SNTG1Q9NSN8 517 aa8.8□□□□□ -1
LIG1-210ENST00000596332 RBFOX1Q9NWB1 397 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 TXNL4BQ9NX01 149 aaKnown RBP8.8□□□□□ -1
LIG1-210ENST00000596332 ZNF581Q9P0T4 197 aa8.8□□□□□ -1
LIG1-210ENST00000596332 CSPG4Q6UVK1 2322 aa8.8□□□□□ -1
LIG1-210ENST00000596332 TRAV1-2A0A0B4J238 106 aa8.79□□□□□ -1
LIG1-210ENST00000596332 A0A1W2PP11 408 aa8.79□□□□□ -1
LIG1-210ENST00000596332 hCG_1807616A0A1W2PRN6 198 aa8.79□□□□□ -1
LIG1-210ENST00000596332 OR2AT4A6NND4 320 aa8.79□□□□□ -1
LIG1-210ENST00000596332 TRAPPC2LH3BP13 241 aa8.79□□□□□ -1
LIG1-210ENST00000596332 CDRT1O95170 752 aa8.79□□□□□ -1
LIG1-210ENST00000596332 LY6G6DO95868 133 aa8.79□□□□□ -1
LIG1-210ENST00000596332 PLATP00750 562 aa8.79□□□□□ -1
LIG1-210ENST00000596332 INHBBP09529 407 aa8.79□□□□□ -1
LIG1-210ENST00000596332 CD36P16671 472 aa8.79□□□□□ -1
LIG1-210ENST00000596332 GLRA1P23415 457 aa8.79□□□□□ -1
LIG1-210ENST00000596332 MAPK3P27361 379 aaPredicted RBP8.79□□□□□ -1
LIG1-210ENST00000596332 CEBPDP49716 269 aaPredicted RBP8.79□□□□□ -1
LIG1-210ENST00000596332 GMFBP60983 142 aa8.79□□□□□ -1
LIG1-210ENST00000596332 QRFPP83859 136 aa8.79□□□□□ -1
LIG1-210ENST00000596332 DGUOKQ16854 277 aa8.79□□□□□ -1
LIG1-210ENST00000596332 HSD17B12Q53GQ0 312 aa8.79□□□□□ -1
LIG1-210ENST00000596332 DDI2Q5TDH0 399 aa8.79□□□□□ -1
LIG1-210ENST00000596332 ELP2Q6IA86 826 aa8.79□□□□□ -1
LIG1-210ENST00000596332 C22orf42Q6IC83 251 aa8.79□□□□□ -1
LIG1-210ENST00000596332 DCDC5Q6ZRR9 648 aa8.79□□□□□ -1
LIG1-210ENST00000596332 SLC16A12Q6ZSM3 486 aa8.79□□□□□ -1
LIG1-210ENST00000596332 C1orf87Q8N0U7 546 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms