RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RFPL4AA6NLU0 287 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 TMEM212A6NML5 194 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 RFPL4AL1F8VTS6 287 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 NDUFA2O43678 99 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 ANGPTL7O43827 346 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 NOS1APO75052 506 aaPredicted RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 GATBO75879 557 aaKnown RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 NXPH2O95156 264 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 SERPINA3P01011 423 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 SFTPBP07988 381 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 MYF6P23409 242 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 NPBWR2P48146 333 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 POU3F4P49335 361 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 FGF12P61328 243 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 ERVK11-1P61568 191 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 RIPK1Q13546 671 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 ATPAF1Q5TC12 328 aaPredicted RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 RPL22L1Q6P5R6 122 aaKnown RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 SLC25A26Q70HW3 274 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 UTS2BQ765I0 119 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 STX19Q8N4C7 294 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 OR51A2Q8NGJ7 313 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 OR5D18Q8NGL1 313 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 OR52N1Q8NH53 320 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 TSEN15Q8WW01 171 aaKnown RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 PP6455Q8WZ26 134 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 BORCS8Q96FH0 119 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 PKIBQ9C010 78 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 TRIM36Q9NQ86 728 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 CNOT2Q9NZN8 540 aaKnown RBP9.53□□□□□ -0.88
VMP1-211ENST00000591315 ZNF69Q9UC07 566 aa9.53□□□□□ -0.88
VMP1-211ENST00000591315 KIAA2026Q5HYC2 2103 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 NDUFB3O43676 98 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 CDK1P06493 297 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 BCL3P20749 454 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 EPHA1P21709 976 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 GATA3P23771 443 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 CPT2P23786 658 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 DUSP1P28562 367 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 MTCP1P56278 107 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
VMP1-211ENST00000591315 ARF6P62330 175 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 MRPL28Q13084 256 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 CNN3Q15417 329 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 DMKNQ6E0U4 476 aaPredicted RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 SLC36A1Q7Z2H8 476 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 EGFL6Q8IUX8 553 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 NANOGP1Q8N7R0 232 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 NANPQ8TBE9 248 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 GHSRQ92847 366 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 C12orf43Q96C57 262 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 C10orf35Q96D05 121 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 OPALINQ96PE5 141 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 OR5M11Q96RB7 305 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 TBX15Q96SF7 602 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 SLC6A7Q99884 636 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 MRI1Q9BV20 369 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 ANKRD60Q9BZ19 345 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 ZCCHC4Q9H5U6 513 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 HES4Q9HCC6 221 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 RBFOX1Q9NWB1 397 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 CHCHD3Q9NX63 227 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 OR14J1Q9UGF5 321 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.89
VMP1-211ENST00000591315 DHDHQ9UQ10 334 aa9.52□□□□□ -0.89
VMP1-211ENST00000591315 A0A1W2PPK0 400 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 MEX3AA1L020 520 aaKnown RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 NKX6-3A6NJ46 265 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 SIGLEC5O15389 551 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 ENSAO43768 121 aaKnown RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 MT-ND2P03891 347 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 RPSAP08865 295 aaKnown RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 NDUFB7P17568 137 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 PRDX2P32119 198 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 RBP2P50120 134 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 NPY4RP50391 375 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 ATP1B3P54709 279 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 SNU13P55769 128 aaKnown RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 IL13RA1P78552 427 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 IL24Q13007 206 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 CCDC58Q4VC31 144 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 BTNL3Q6UXE8 466 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 DNAAF1Q8NEP3 725 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 TMEM185AQ8NFB2 350 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 SMIM19Q96E16 107 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 SDSLQ96GA7 329 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 PGLYRP3Q96LB9 341 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 CEP19Q96LK0 163 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 CNBD2Q96M20 576 aa9.51□□□□□ -0.89
VMP1-211ENST00000591315 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
VMP1-211ENST00000591315 PCGF1Q9BSM1 259 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms