RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 WDR54Q9H977 334 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CCL3P10147 92 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LIFP15018 202 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CRYGSP22914 178 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NUBP1P53384 320 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DSCR4P56555 118 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MRPS34P82930 218 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PDZK1IP1Q13113 114 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LYPD6BQ8NI32 183 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAAP24Q9BTP7 215 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ULBP2Q9BZM5 246 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PROK2Q9HC23 129 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PPP1R14DQ9NXH3 145 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LHX6Q9UPM6 363 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM157AC9JC47 383 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PIGPP57054 158 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM3AP98173 230 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TAF9Q16594 264 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GLYATL2Q8WU03 294 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OCIAD1Q9NX40 245 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
CDK5RAP3-237ENST00000585163 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ARID1AO14497 2285 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ANGPTL7O43827 346 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DTYMKP23919 212 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CD80P33681 288 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DVL1P1P54792 670 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RRADP55042 308 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RSU1Q15404 277 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 Q6ZRG5 221 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 C20orf196Q8IYI0 205 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NTNG2Q96CW9 530 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NECAP2Q9NVZ3 263 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 IGKV1-27A0A075B6S5 117 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 C9JQL5 133 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 AGPAT2O15120 278 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SPRY1O43609 319 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CRYBA1P05813 215 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM76BQ5HYJ3 339 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DMBX1Q8NFW5 382 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RXFP4Q8TDU9 374 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GALNT14Q96FL9 552 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 IMMP1LQ96LU5 166 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SULT4A1Q9BR01 284 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NXT1Q9UKK6 140 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF98A6NK75 572 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 K7ESF4 209 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SYNGR3O43761 229 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OPRM1P35372 400 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ID4P47928 161 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RAB35Q15286 201 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SKA3Q8IX90 412 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 KIRREL1Q96J84 757 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 BIN3Q9NQY0 253 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 A0A0J9YW62 118 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM230AA0A1W2PPH8 454 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SGCEO43556 437 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR8U9P0C7N5 309 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SPP1P10451 314 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FGF5P12034 268 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CHATP28329 748 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RAC1P63000 192 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TMEM187Q14656 261 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ASCL4Q6XD76 172 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR8U1Q8NH10 309 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ERGIC1Q969X5 290 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ARV1Q9H2C2 271 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ESRP2Q9H6T0 727 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SH2D2AQ9NP31 389 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DKKL1Q9UK85 242 aa12.35□□□□□ -0.43
CDK5RAP3-237ENST00000585163 E5RGE8 158 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TNFSF11O14788 317 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GDF9O60383 454 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SCGB1D2O95969 90 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 UMODP07911 640 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF728P0DKX0 622 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms