RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 PRLHRP49683 370 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 TAS2R46P59540 309 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 RAB4BP61018 213 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 ARF6P62330 175 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 VSNL1P62760 191 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 MED21Q13503 144 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 NAB1Q13506 487 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 PDK2Q15119 407 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 IMPG1Q17R60 797 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 ACTBL2Q562R1 376 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 YIF1BQ5BJH7 314 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 CT45A1Q5HYN5 189 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 TEX30Q5JUR7 227 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 SLC51BQ86UW2 128 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 GID4Q8IVV7 300 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 C10orf67Q8IYJ2 551 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 ZNF101Q8IZC7 436 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 ARHGAP18Q8N392 663 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 OR4D6Q8NGJ1 314 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 OR5D18Q8NGL1 313 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 CT45A3Q8NHU0 189 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 WDR34Q96EX3 536 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 NAPGQ99747 312 aaPredicted RBP1.9□□□□□ -2.11
NLK-206ENST00000584878 TMEM243Q9BU79 118 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 SRRQ9GZT4 340 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 LHX5Q9H2C1 402 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 WDR55Q9H6Y2 383 aaPredicted RBP1.9□□□□□ -2.11
NLK-206ENST00000584878 PRSS16Q9NQE7 514 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 AGPAT4Q9NRZ5 378 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 USE1Q9NZ43 259 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 STMN3Q9NZ72 180 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 C3orf18Q9UK00 162 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 SLC17A4Q9Y2C5 497 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 FADS3Q9Y5Q0 445 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 KPTNQ9Y664 436 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 CAMSAP1Q5T5Y3 1602 aa1.9□□□□□ -2.11
NLK-206ENST00000584878 USP42Q9H9J4 1324 aaKnown RBP1.9□□□□□ -2.11
NLK-206ENST00000584878 AQRO60306 1485 aaKnown RBP eCLIP1.89□□□□□ -2.112e-6■■■■■ 34.3
NLK-206ENST00000584878 NUP153P49790 1475 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 EIF3AQ14152 1382 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 RAB3GAP2Q9H2M9 1393 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 IGHV3OR16-8A0A075B7F1 116 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 IGHV3-49A0A0A0MS15 119 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 A0A1W2PRD5 423 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 FABP12A6NFH5 140 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 PCNX2A6NKB5 2137 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 AQP9O43315 295 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SCELO95171 688 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 GP1BAP07359 652 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SNRPAP09012 282 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 OR4E1P0C645 316 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 MYL2P10916 166 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 ZNF7P17097 686 aaPredicted RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 SYT1P21579 422 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 CD82P27701 267 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 PCK1P35558 622 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SLC1A2P43004 574 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 CAPZBP47756 277 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 GNG10P50151 68 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 RAB7AP51149 207 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 PSMD4P55036 377 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 MLF1P58340 268 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 AP3S2P59780 193 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 CXCR4P61073 352 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 ATP6V0D1P61421 351 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 ERVS71-1P61550 626 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 LCN2P80188 198 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 ZBTB6Q15916 424 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 EXOC3L4Q17RC7 722 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 NDUFAF6Q330K2 333 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SPIN3Q5JUX0 258 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 TPTE2P1Q5T6R2 138 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 APOBEC3HQ6NTF7 200 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 GUSBP11Q6P575 273 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 TAC4Q86UU9 113 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 CRLF3Q8IUI8 442 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 CBLN2Q8IUK8 224 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 APRG1Q8IVJ8 170 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 BOD1L2Q8IYS8 172 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SYS1Q8N2H4 156 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 TMEM156Q8N614 296 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 APCDD1LQ8NCL9 501 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 C19orf18Q8NEA5 215 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 OR6Q1Q8NGQ2 317 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 OR1J4Q8NGS1 313 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 LGALS14Q8TCE9 139 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 RNF133Q8WVZ7 376 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 TMEM239Q8WW34 195 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 JSRP1Q96MG2 331 aaPredicted RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 SERPINB11Q96P15 392 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 IP6K3Q96PC2 410 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 ZNF426Q9BUY5 554 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 MAP1LC3CQ9BXW4 147 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 SLIRPQ9GZT3 109 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 RHBDL2Q9NX52 303 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 TAS2R9Q9NYW1 312 aa1.89□□□□□ -2.11
NLK-206ENST00000584878 MYEF2Q9P2K5 600 aaKnown RBP1.89□□□□□ -2.11
NLK-206ENST00000584878 PAIP2BQ9ULR5 123 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms