RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FAM234AQ9H0X4 552 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 PPP1R3EQ9H7J1 279 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 FGF20Q9NP95 211 aaPredicted RBP11.05□□□□□ -0.64
SS18-222ENST00000582792 AASSQ9UDR5 926 aa11.05□□□□□ -0.64
SS18-222ENST00000582792 NKX6-3A6NJ46 265 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 IGHA1P01876 353 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 GNAO1P09471 354 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 PIPP12273 146 aaPredicted RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 GNALP38405 381 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 CX3CR1P49238 355 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 RIDAP52758 137 aaKnown RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 CAV3P56539 151 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 PSMA6P60900 246 aaKnown RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 BLMHQ13867 455 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 LY6EQ16553 131 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 AANATQ16613 207 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 DGUOKQ16854 277 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 TIGD6Q17RP2 521 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 ZNF684Q5T5D7 378 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 HCP5Q6MZN7 132 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 CRIP3Q6Q6R5 217 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 PRSS45Q7RTY3 260 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 ACBD7Q8N6N7 88 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 OR10H4Q8NGA5 316 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 OR52H1Q8NGJ2 320 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 OR10Z1Q8NGY1 313 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 CNIH3Q8TBE1 160 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 SGK3Q96BR1 496 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 MED30Q96HR3 178 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 AJUBAQ96IF1 538 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 GAFA1Q96PS6 74 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 PAPOLGQ9BWT3 736 aaKnown RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 WDR13Q9H1Z4 485 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 RAB18Q9NP72 206 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 SNTG1Q9NSN8 517 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 CNOT2Q9NZN8 540 aaKnown RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 SLC25A10Q9UBX3 287 aaPredicted RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 SF3B6Q9Y3B4 125 aaKnown RBP11.04□□□□□ -0.64
SS18-222ENST00000582792 RHBDD3Q9Y3P4 386 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 LRP12Q9Y561 859 aa11.04□□□□□ -0.64
SS18-222ENST00000582792 A0A1W2PQ09 198 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 A0A1W2PQL4 384 aaPredicted RBP11.03□□□□□ -0.64
SS18-222ENST00000582792 EFCAB10A6NFE3 127 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 METTL15A6NJ78 407 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 SIGLEC5O15389 551 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 XPNPEP2O43895 674 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 KRT8P05787 483 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 ANXA2P07355 339 aaKnown RBP11.03□□□□□ -0.64
SS18-222ENST00000582792 CFL1P23528 166 aaKnown RBP11.03□□□□□ -0.64
SS18-222ENST00000582792 DCKP27707 260 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 GSK3AP49840 483 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 GMFBP60983 142 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 ZNF85Q03923 595 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 SNCBQ16143 134 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 LRRC75BQ2VPJ9 315 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
SS18-222ENST00000582792 PLEKHG7Q6ZR37 379 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 DTX3Q8N9I9 347 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 CSNK2A3Q8NEV1 391 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 ANGPTL6Q8NI99 470 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 RORBQ92753 470 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 ZNF184Q99676 751 aaPredicted RBP11.03□□□□□ -0.64
SS18-222ENST00000582792 MICU1Q9BPX6 476 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 RTL8AQ9BWD3 113 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 RGCCQ9H4X1 137 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 NECAP2Q9NVZ3 263 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
SS18-222ENST00000582792 DAPL1A0PJW8 107 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 ANXA2P2A6NMY6 339 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 PRR32B1ATL7 298 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 TFF1P04155 84 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 VSIG10L2P0DP72 767 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 NDUFB7P17568 137 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 ZNF121P58317 390 aaPredicted RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 ACTA2P62736 377 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 ACTG2P63267 376 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 GALEQ14376 348 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 SMN1Q16637 294 aaKnown RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 C6orf141Q5SZD1 244 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 FAM57BQ71RH2 274 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 SSX6Q7RTT6 188 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 FTMTQ8N4E7 242 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 OR52I1Q8NGK6 324 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 HAVCR2Q8TDQ0 301 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 SGCDQ92629 289 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 RPL3LQ92901 407 aaKnown RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 OR10A2Q9H208 303 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms