RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ABCB9Q9NP78 766 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 RNF114Q9Y508 228 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 MPC1Q9Y5U8 109 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 F5H5P2 479 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 GMDSO60547 372 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 CRYBA1P05813 215 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 CD2P06729 351 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 ADH4P08319 380 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 OCM2P0CE71 109 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 VSIG8P0DPA2 414 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 CPEP16870 476 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 GPR50Q13585 617 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 TPBGQ13641 420 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 CLVS2Q5SYC1 327 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 PLCXD3Q63HM9 321 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 ZDHHC16Q969W1 377 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 DACT3Q96B18 629 aaPredicted RBP16.05■□□□□ 0.16
LIMD2-209ENST00000580222 FGGYQ96C11 551 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 HIST1H2AAQ96QV6 131 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 EGLN1Q9GZT9 426 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 GPR173Q9NS66 373 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 TMEM106BQ9NUM4 274 aa16.05■□□□□ 0.16
LIMD2-209ENST00000580222 A0A1B0GWJ7 208 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 CLPXO76031 633 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 INMTO95050 263 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 NRASP01111 189 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 CD55P08174 381 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 PPIAL4GP0DN37 164 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 TMEM155Q4W5P6 130 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 KPRPQ5T749 579 aaPredicted RBP16.04■□□□□ 0.16
LIMD2-209ENST00000580222 Q6YL49 198 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 MOB3CQ70IA8 216 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 SPICQ8N5J4 248 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 SPERTQ8NA61 448 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 PP6455Q8WZ26 134 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 ADAT3Q96EY9 351 aaPredicted RBP16.04■□□□□ 0.16
LIMD2-209ENST00000580222 OR2V2Q96R30 315 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 MICU1Q9BPX6 476 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 PPP1R3EQ9H7J1 279 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 IL19Q9UHD0 177 aa16.04■□□□□ 0.16
LIMD2-209ENST00000580222 COL7A1Q02388 2944 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 TRBV5-5A0A0J9YX44 114 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MAGEA13PA6NCF6 341 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 ANKRD61A6NGH8 418 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 GATBO75879 557 aaKnown RBP16.03■□□□□ 0.16
LIMD2-209ENST00000580222 SERPINA3P01011 423 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 WNT2P09544 360 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 SMIM18P0DKX4 95 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 SRP9P49458 86 aaKnown RBP16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MZT1Q08AG7 82 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 Q499Y3 187 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 CEP78Q5JTW2 689 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MS4A15Q8N5U1 240 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 ITLN1Q8WWA0 313 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MUL1Q969V5 352 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 TMEM106AQ96A25 262 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 ITPKCQ96DU7 683 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MEGF10Q96KG7 1140 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 RTL8AQ9BWD3 113 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 CHST5Q9GZS9 411 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 TCF7L1Q9HCS4 588 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 C14orf119Q9NWQ9 140 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 OR5V1Q9UGF6 321 aa16.03■□□□□ 0.16
LIMD2-209ENST00000580222 MELTFP08582 738 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 TNFRSF1AP19438 455 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 CD200P41217 278 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 RPS11P62280 158 aaKnown RBP eCLIP16.02■□□□□ 0.16
LIMD2-209ENST00000580222 BTG1P62324 171 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 RPS25P62851 125 aaKnown RBP16.02■□□□□ 0.16
LIMD2-209ENST00000580222 CNN3Q15417 329 aaKnown RBP16.02■□□□□ 0.16
LIMD2-209ENST00000580222 TRAM1Q15629 374 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 RUSC1-AS1Q66K80 236 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 TMEM42Q69YG0 159 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 KRT74Q7RTS7 529 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 HPSE2Q8WWQ2 592 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 THRSPQ92748 146 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 OR14A2Q96R54 314 aa16.02■□□□□ 0.16
LIMD2-209ENST00000580222 MRPS26Q9BYN8 205 aaKnown RBP16.02■□□□□ 0.16
LIMD2-209ENST00000580222 IGHV3-64DA0A0J9YX35 117 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 TRIM64CA6NLI5 447 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 CEACAM18A8MTB9 384 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 ZNF879B4DU55 563 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 C3orf80F5H4A9 247 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 CCRL2O00421 344 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 OCMP0CE72 109 aaPredicted RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 PSMA1P25786 263 aaKnown RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 MAPK3P27361 379 aaPredicted RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 GABRA5P31644 462 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 GP2P55259 537 aaKnown RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 FAM189A2Q15884 450 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 SSX1Q16384 188 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 ESCO2Q56NI9 601 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 DMRTC1Q5HYR2 192 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 SYT6Q5T7P8 510 aaPredicted RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 SAMD5Q5TGI4 173 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 PRAMEF6Q5VXH4 476 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 SERPINA12Q8IW75 414 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 OR13C9Q8NGT0 318 aa16.01■□□□□ 0.15
LIMD2-209ENST00000580222 TRMT10AQ8TBZ6 339 aaKnown RBP16.01■□□□□ 0.15
LIMD2-209ENST00000580222 NPRL2Q8WTW4 380 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms