RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 ANGPTL7O43827 346 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 CIB2O75838 187 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 GATBO75879 557 aaKnown RBP9.42□□□□□ -0.9
SSH2-208ENST00000579040 TSPAN9O75954 239 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 RPP14O95059 124 aaKnown RBP9.42□□□□□ -0.9
SSH2-208ENST00000579040 CDC42P60953 191 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 ERVK11-1P61568 191 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 PRB3Q04118 309 aaPredicted RBP9.42□□□□□ -0.9
SSH2-208ENST00000579040 SRSF4Q08170 494 aaKnown RBP9.42□□□□□ -0.9
SSH2-208ENST00000579040 AANATQ16613 207 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 HCP5Q6MZN7 132 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 Q6ZSV7 163 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 CALHM1Q8IU99 346 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 PNKDQ8N490 385 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 C10orf35Q96D05 121 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 ZNF488Q96MN9 340 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 TBX5Q99593 518 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 RBM4BQ9BQ04 359 aaKnown RBP9.42□□□□□ -0.9
SSH2-208ENST00000579040 USE1Q9NZ43 259 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 SLC7A11Q9UPY5 501 aa9.42□□□□□ -0.9
SSH2-208ENST00000579040 TET2Q6N021 2002 aaPredicted RBP9.41□□□□□ -0.9
SSH2-208ENST00000579040 SYT7O43581 403 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 ATP6V1E1P36543 226 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 POLR2IP36954 125 aaKnown RBP9.41□□□□□ -0.9
SSH2-208ENST00000579040 TMEM200BQ69YZ2 307 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 FAM220AQ7Z4H9 259 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 OR10H4Q8NGA5 316 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 RORBQ92753 470 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 ADI1Q9BV57 179 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 CHST5Q9GZS9 411 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
SSH2-208ENST00000579040 VWFP04275 2813 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 H3BUX3 64 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 K7N7A8 449 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 APOL3O95236 402 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 SERPINA3P01011 423 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 RBP4P02753 201 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 TK1P04183 234 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 UBCP0CG48 685 aaKnown RBP9.4□□□□□ -0.9
SSH2-208ENST00000579040 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
SSH2-208ENST00000579040 FUT6P51993 359 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 KRTAP10-3P60369 221 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 ISL1P61371 349 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 ODF4Q2M2E3 257 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 LRRC75BQ2VPJ9 315 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 ANGPTL5Q86XS5 388 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 MKXQ8IYA7 352 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 C11orf42Q8N5U0 333 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 TRMT10AQ8TBZ6 339 aaKnown RBP9.4□□□□□ -0.9
SSH2-208ENST00000579040 TRUB1Q8WWH5 349 aaKnown RBP9.4□□□□□ -0.9
SSH2-208ENST00000579040 PP6455Q8WZ26 134 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 EME1Q96AY2 570 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 AJUBAQ96IF1 538 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 CEP19Q96LK0 163 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 SSX3Q99909 188 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 MMP27Q9H306 513 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
SSH2-208ENST00000579040 TCF7L1Q9HCS4 588 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 RAB18Q9NP72 206 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 IMPAD1Q9NX62 359 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 OR14J1Q9UGF5 321 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 ORC6Q9Y5N6 252 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 NOTCH1P46531 2555 aa9.4□□□□□ -0.9
SSH2-208ENST00000579040 LOC107986453A0A1B0GWG9 222 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 FAM230AA0A1W2PPH8 454 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 A6NIN4 97 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 SAC3D1A6NKF1 404 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 CHRM2P08172 466 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 LGALS4P56470 323 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 ACTC1P68032 377 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 ACTA1P68133 377 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 ZNF273Q14593 569 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
SSH2-208ENST00000579040 UBE2V2Q15819 145 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 SLC25A30Q5SVS4 291 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 ASPHD2Q6ICH7 369 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 C11orf88Q6PI97 169 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 LIAT1Q6ZQX7 453 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 KCTD20Q7Z5Y7 419 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 Q8IYB0 196 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 DTX3Q8N9I9 347 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 ASCC1Q8N9N2 400 aaKnown RBP9.39□□□□□ -0.91
SSH2-208ENST00000579040 DNAAF1Q8NEP3 725 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 OR4M1Q8NGD0 313 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 C17orf50Q8WW18 174 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 BORCS8Q96FH0 119 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 HRASLS5Q96KN8 279 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 PPA2Q9H2U2 334 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 RANBP3Q9H6Z4 567 aaPredicted RBP9.39□□□□□ -0.91
SSH2-208ENST00000579040 FBLN5Q9UBX5 448 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 GNG8Q9UK08 70 aa9.39□□□□□ -0.91
SSH2-208ENST00000579040 KIAA2026Q5HYC2 2103 aa9.38□□□□□ -0.91
SSH2-208ENST00000579040 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
SSH2-208ENST00000579040 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
SSH2-208ENST00000579040 KCNAB3O43448 404 aa9.38□□□□□ -0.91
SSH2-208ENST00000579040 ZNF737O75373 536 aa9.38□□□□□ -0.91
SSH2-208ENST00000579040 ALPLP05186 524 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms