RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 ASCC1Q8N9N2 400 aaKnown RBP11.17□□□□□ -0.62
PRPF8-202ENST00000571346 OR4M1Q8NGD0 313 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 OR5D13Q8NGL4 314 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 RORBQ92753 470 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 NRIP2Q9BQI9 281 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 OSBPL10Q9BXB5 764 aa11.17□□□□□ -0.62
PRPF8-202ENST00000571346 A0A1W2PPH5 198 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 SULT1C4O75897 302 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
PRPF8-202ENST00000571346 COX7A1P24310 79 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 MPZP25189 248 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 PRDX2P32119 198 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 UBE2E1P51965 193 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 ZIK1Q3SY52 487 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-202ENST00000571346 TREML4Q6UXN2 200 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 PRSS35Q8N3Z0 413 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 SLAMF9Q96A28 289 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 CHST5Q9GZS9 411 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
PRPF8-202ENST00000571346 ALPLP05186 524 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 CCL3L1P16619 93 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 ACTC1P68032 377 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 ACTA1P68133 377 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 ZNF85Q03923 595 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 ACSM1Q08AH1 577 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 TMED1Q13445 227 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 CNN3Q15417 329 aaKnown RBP11.15□□□□□ -0.62
PRPF8-202ENST00000571346 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-202ENST00000571346 C1orf122Q6ZSJ8 110 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 C17orf50Q8WW18 174 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 RNFT2Q96EX2 444 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 CEP19Q96LK0 163 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 PKIBQ9C010 78 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 HES4Q9HCC6 221 aa11.15□□□□□ -0.62
PRPF8-202ENST00000571346 SF3B6Q9Y3B4 125 aaKnown RBP11.15□□□□□ -0.62
PRPF8-202ENST00000571346 VWFP04275 2813 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 MEX3AA1L020 520 aaKnown RBP11.14□□□□□ -0.63
PRPF8-202ENST00000571346 H3BUX3 64 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 NOS1APO75052 506 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-202ENST00000571346 ENTPD6O75354 484 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 SERPINA3P01011 423 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 TK1P04183 234 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 ZNF20P17024 532 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 PAX6P26367 422 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 POU3F4P49335 361 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 ALDH3A2P51648 485 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 BMXP51813 675 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 EDDM3BP56851 147 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 COL10A1Q03692 680 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 IL24Q13007 206 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 ZNF273Q14593 569 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 Q6ZSR3 168 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 Q6ZSV7 163 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 RDH10Q8IZV5 341 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 OR5R1Q8NH85 324 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
PRPF8-202ENST00000571346 UBE2FQ969M7 185 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 USE1Q9NZ43 259 aa11.14□□□□□ -0.63
PRPF8-202ENST00000571346 IGKV1-27A0A075B6S5 117 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 A0A1W2PR64 198 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 DAPL1A0PJW8 107 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 F8VVB4 439 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 F8VWA3 439 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 H3BNX3 289 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 OCM2P0CE71 109 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 OCMP0CE72 109 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-202ENST00000571346 FUT6P51993 359 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 SNU13P55769 128 aaKnown RBP11.13□□□□□ -0.63
PRPF8-202ENST00000571346 EDDM3AQ14507 147 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 LY6EQ16553 131 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 MIDNQ504T8 468 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 ZFP1Q6P2D0 407 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 CCDC54Q8NEL0 328 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 CITED1Q99966 193 aa11.13□□□□□ -0.63
PRPF8-202ENST00000571346 SNTNA6NMZ2 147 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 M0QZ24 198 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 SLC16A6O15403 523 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 WIPF1O43516 503 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 HTR1AP08908 422 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 LGALS4P56470 323 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 ISL1P61371 349 aa11.12□□□□□ -0.63
PRPF8-202ENST00000571346 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms