RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MXRA5Q9NR99 2828 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 TRAV38-1A0A0B4J264 116 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 ISPDA4D126 451 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 NXPH2O95156 264 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 SLC25A16P16260 332 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 CFHR2P36980 270 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 PMELP40967 661 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 PTGFRP43088 359 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 GMFBP60983 142 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 RSU1Q15404 277 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 MICBQ29980 383 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 GPR107Q5VW38 600 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 TPRA1Q86W33 373 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 CALHM1Q8IU99 346 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 SAXO1Q8IYX7 474 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 OR5D18Q8NGL1 313 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 FGF23Q9GZV9 251 aaPredicted RBP13.49□□□□□ -0.25
USB1-215ENST00000569252 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
USB1-215ENST00000569252 METTL17Q9H7H0 456 aaPredicted RBP13.49□□□□□ -0.25
USB1-215ENST00000569252 PLGRKTQ9HBL7 147 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 SMURF1Q9HCE7 757 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 GLS2Q9UI32 602 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 PCDHB10Q9UN67 800 aa13.49□□□□□ -0.25
USB1-215ENST00000569252 AK6Q9Y3D8 172 aaKnown RBP13.49□□□□□ -0.25
USB1-215ENST00000569252 IGKV1-27A0A075B6S5 117 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 AKR7A2O43488 359 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 SPRY1O43609 319 aaPredicted RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 SYNGR1O43759 233 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 ZNF780AO75290 641 aaPredicted RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 RHBDL1O75783 438 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 CSTBP04080 98 aaKnown RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 ACAA1P09110 424 aaPredicted RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 RAB3BP20337 219 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 GIFP27352 417 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 MTNR1BP49286 362 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 BMXP51813 675 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 LSM3P62310 102 aaKnown RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 BTG1P62324 171 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 GPR176Q14439 515 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 LRRTM1Q86UE6 522 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 ANKRD13BQ86YJ7 626 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 CLVS1Q8IUQ0 354 aaPredicted RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 MUC20Q8N307 709 aaPredicted RBP13.48□□□□□ -0.25
USB1-215ENST00000569252 C10orf105Q8TEF2 133 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 SLAMF9Q96A28 289 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 CEP19Q96LK0 163 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 RHOFQ9HBH0 211 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 V9GY05 133 aa13.48□□□□□ -0.25
USB1-215ENST00000569252 CCDC160A6NGH7 325 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 OOEPA6NGQ2 149 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 NDUFA2O43678 99 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 RP2O75695 350 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 LHBP01229 141 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 MUC1P15941 1255 aaPredicted RBP13.47□□□□□ -0.25
USB1-215ENST00000569252 MPZP25189 248 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 MDH2P40926 338 aaKnown RBP13.47□□□□□ -0.25
USB1-215ENST00000569252 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 RIN1Q13671 783 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 AVPI1Q5T686 147 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 AWAT2Q6E213 333 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 SFRP4Q6FHJ7 346 aaPredicted RBP13.47□□□□□ -0.25
USB1-215ENST00000569252 ASPHD2Q6ICH7 369 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 SPICQ8N5J4 248 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 POC1AQ8NBT0 407 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 DEFB108BQ8NET1 73 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 PXT1Q8NFP0 134 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 CENPOQ9BU64 300 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 GHRLQ9UBU3 117 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
USB1-215ENST00000569252 LGALS8O00214 317 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 ANGPTL7O43827 346 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 NOS1APO75052 506 aaPredicted RBP13.46□□□□□ -0.25
USB1-215ENST00000569252 CDRT1O95170 752 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 ZNF205O95201 554 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 PGA5P0DJD9 388 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 SDC2P34741 201 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 NR4A2P43354 598 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 GCSAMQ8N6F7 178 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 EMG1Q92979 244 aaKnown RBP13.46□□□□□ -0.25
USB1-215ENST00000569252 GAL3ST1Q99999 423 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 BPESC1Q9GZL8 116 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 CNTD2Q9H8S5 307 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 MRPS28Q9Y2Q9 187 aaKnown RBP13.46□□□□□ -0.25
USB1-215ENST00000569252 WIPI2Q9Y4P8 454 aa13.46□□□□□ -0.25
USB1-215ENST00000569252 SRRM5B3KS81 715 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 KDM4BO94953 1096 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 HTR3BO95264 441 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 FSTL3O95633 263 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 UBBP0CG47 229 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 HTR2CP28335 458 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 CD80P33681 288 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 OR3A4PP47883 348 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 CAPZA1P52907 286 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 MXD1Q05195 221 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 RAB11BQ15907 218 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 GLIPR1L1Q6UWM5 242 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms