RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 BLOC1S1P78537 153 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 CNN3Q15417 329 aaKnown RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 RPUSD3Q6P087 351 aaKnown RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 LDLRAD3Q86YD5 345 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 SEMA6DQ8NFY4 1073 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 ULBP2Q9BZM5 246 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 METTL9Q9H1A3 318 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 PROK2Q9HC23 129 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 UQCC1Q9NVA1 299 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 P4HTMQ9NXG6 502 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 PLEK2Q9NYT0 353 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 ANXA10Q9UJ72 324 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 EP300Q09472 2414 aaPredicted RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 H7C2Y5 167 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 SERPINA7P05543 415 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 NBL1P41271 181 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 SULT1A2P50226 295 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 Q0VFX4 171 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 GUCA2BQ16661 112 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 RAET1LQ5VY80 246 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 GALNTL5Q7Z4T8 443 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 GPR137CQ8N3F9 429 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 ZIC4Q8N9L1 334 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 BHLHE23Q8NDY6 225 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 OR51F2Q8NH61 342 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 FNDC9Q8TBE3 224 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 NPRL2Q8WTW4 380 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 SGK3Q96BR1 496 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 SGCZQ96LD1 299 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 RBM24Q9BX46 236 aaKnown RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 TAF9BQ9HBM6 251 aa14.6□□□□□ -0.07
CMTM3-213ENST00000566756 ZNF701Q9NV72 531 aaPredicted RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 MCTS1Q9ULC4 181 aaKnown RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 KLF2Q9Y5W3 355 aaPredicted RBP14.6□□□□□ -0.07
CMTM3-213ENST00000566756 PCSK5Q92824 1860 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 JTBO76095 146 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 IFNA21P01568 189 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 HEXAP06865 529 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 HOXB5P09067 269 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 CST2P09228 141 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 ZNF708P17019 499 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 ARHGDIBP52566 201 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 SMCO1Q147U7 214 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 HFEQ30201 348 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 TMEM268Q5VZI3 342 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 HAGHLQ6PII5 290 aaPredicted RBP14.59□□□□□ -0.07
CMTM3-213ENST00000566756 DHRS11Q6UWP2 260 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 TMEM156Q8N614 296 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 BOLLQ8N9W6 283 aaKnown RBP14.59□□□□□ -0.07
CMTM3-213ENST00000566756 DEFB124Q8NES8 71 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 ZNF2Q9BSG1 426 aaPredicted RBP14.59□□□□□ -0.07
CMTM3-213ENST00000566756 HPF1Q9NWY4 346 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 DKKL1Q9UK85 242 aa14.59□□□□□ -0.07
CMTM3-213ENST00000566756 NCOA6Q14686 2063 aaPredicted RBP14.59□□□□□ -0.07
CMTM3-213ENST00000566756 DEDDO75618 318 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 CBR3O75828 277 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 FTH1P19P0C7X4 201 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 CCL3P10147 92 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 IAH1Q2TAA2 248 aaPredicted RBP14.58□□□□□ -0.07
CMTM3-213ENST00000566756 KRTAP27-1Q3LI81 207 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 C6orf201Q7Z4U5 140 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 LRRC18Q8N456 261 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 PIGTQ969N2 578 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 ZNF775Q96BV0 537 aaPredicted RBP14.58□□□□□ -0.07
CMTM3-213ENST00000566756 FBXO17Q96EF6 278 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 GALNT14Q96FL9 552 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 POM121Q96HA1 1249 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 PLEKHA2Q9HB19 425 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 PARP11Q9NR21 331 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 PRR13Q9NZ81 148 aa14.58□□□□□ -0.07
CMTM3-213ENST00000566756 WDFY3Q8IZQ1 3526 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 SYNGR3O43761 229 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 KNG1P01042 644 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 CD82P27701 267 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 RPL12P30050 165 aaKnown RBP14.58□□□□□ -0.08
CMTM3-213ENST00000566756 MTCP1P56278 107 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 S100A10P60903 97 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 LHFPL2Q6ZUX7 228 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 DTX1Q86Y01 620 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 ZNF100Q8IYN0 542 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 LRTM2Q8N967 370 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 MICU1Q9BPX6 476 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 TLNRD1Q9H1K6 362 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 ELL3Q9HB65 397 aaPredicted RBP14.58□□□□□ -0.08
CMTM3-213ENST00000566756 RHOFQ9HBH0 211 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 TREM1Q9NP99 234 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 ZFP57Q9NU63 452 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 NECAP2Q9NVZ3 263 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 GSKIPQ9P0R6 139 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 KCNIP3Q9Y2W7 256 aa14.58□□□□□ -0.08
CMTM3-213ENST00000566756 IGKV1D-8A0A087WSZ0 117 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 K7EPK0 472 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 SGCEO43556 437 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 SFTPBP07988 381 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 TMEM225BP0DP42 221 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 RAC3P60763 192 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 FAM3AP98173 230 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 SNAI3Q3KNW1 292 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 TMEM42Q69YG0 159 aa14.57□□□□□ -0.08
CMTM3-213ENST00000566756 TMEM200AQ86VY9 491 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms