RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 A0A1W2PRM7 423 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 METTL15A6NJ78 407 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 KCNAB3O43448 404 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 SYNGR1O43759 233 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 GATBO75879 557 aaKnown RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 SERPINA3P01011 423 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 RBP4P02753 201 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 EPHA2P29317 976 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 ERVFRD-1P60508 538 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 ERVK11-1P61568 191 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 LRRC75BQ2VPJ9 315 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 DMRTC1Q5HYR2 192 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 TMEM200BQ69YZ2 307 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 BCDIN3DQ7Z5W3 292 aaKnown RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 CATSPERDQ86XM0 798 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 UBE2FQ969M7 185 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 CENPNQ96H22 339 aaPredicted RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 SSX3Q99909 188 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 RBM4BQ9BQ04 359 aaKnown RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 ADI1Q9BV57 179 aa12.23□□□□□ -0.45
SPG7-210ENST00000564409 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
SPG7-210ENST00000564409 TET2Q6N021 2002 aaPredicted RBP12.22□□□□□ -0.45
SPG7-210ENST00000564409 A0A1W2PQL4 384 aaPredicted RBP12.22□□□□□ -0.45
SPG7-210ENST00000564409 H3BUX3 64 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 K7N7A8 449 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 M0R129 80 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 SYT7O43581 403 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 TK1P04183 234 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 CHRM2P08172 466 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 FUT6P51993 359 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 DLX1P56177 255 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 LGALS4P56470 323 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 DEFA6Q01524 100 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 PDLIM3Q53GG5 364 aaPredicted RBP12.22□□□□□ -0.45
SPG7-210ENST00000564409 C1orf146Q5VVC0 180 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 MKXQ8IYA7 352 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 PNKDQ8N490 385 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 CIB1Q99828 191 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 CDCA4Q9BXL8 241 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 GABARAPL3Q9BY60 117 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 PPA2Q9H2U2 334 aa12.22□□□□□ -0.45
SPG7-210ENST00000564409 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.45
SPG7-210ENST00000564409 RPP14O95059 124 aaKnown RBP12.21□□□□□ -0.45
SPG7-210ENST00000564409 UBCP0CG48 685 aaKnown RBP12.21□□□□□ -0.45
SPG7-210ENST00000564409 GABRA5P31644 462 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 KIR2DS4P43632 304 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 CDC42P60953 191 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.45
SPG7-210ENST00000564409 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 KCTD20Q7Z5Y7 419 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 AMIGO2Q86SJ2 522 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 Q8IYB0 196 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 ENTHD1Q8IYW4 607 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 C11orf42Q8N5U0 333 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 OR4C13Q8NGP0 309 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 TRUB1Q8WWH5 349 aaKnown RBP12.21□□□□□ -0.45
SPG7-210ENST00000564409 PP6455Q8WZ26 134 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 RORBQ92753 470 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 AJUBAQ96IF1 538 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 CEP19Q96LK0 163 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 ZNF488Q96MN9 340 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 CHST5Q9GZS9 411 aa12.21□□□□□ -0.45
SPG7-210ENST00000564409 C17orf98A8MV24 154 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 VGLL3A8MV65 326 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
SPG7-210ENST00000564409 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
SPG7-210ENST00000564409 FAM220AQ7Z4H9 259 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 ANGPTL5Q86XS5 388 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 DNAAF1Q8NEP3 725 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 OR10H4Q8NGA5 316 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
SPG7-210ENST00000564409 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 OAZ3Q9UMX2 235 aa12.2□□□□□ -0.46
SPG7-210ENST00000564409 TBL2Q9Y4P3 447 aaKnown RBP12.2□□□□□ -0.46
SPG7-210ENST00000564409 FAM230AA0A1W2PPH8 454 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 FAM90A8PA6NJQ4 464 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 CIB2O75838 187 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 ZNF728P0DKX0 622 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 HERPUD1Q15011 391 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 UBE2V2Q15819 145 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 SLC25A30Q5SVS4 291 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 CRIP3Q6Q6R5 217 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 Q6ZTK2 550 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 GDPD3Q7L5L3 318 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 SSX6Q7RTT6 188 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 OR8H2Q8N162 312 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 ASCC1Q8N9N2 400 aaKnown RBP12.19□□□□□ -0.46
SPG7-210ENST00000564409 OR4M1Q8NGD0 313 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
SPG7-210ENST00000564409 EME1Q96AY2 570 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 BORCS8Q96FH0 119 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms