RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ADAT3Q96EY9 351 aaPredicted RBP4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 MGLLQ99685 303 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 FGF23Q9GZV9 251 aaPredicted RBP4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 LIME1Q9H400 295 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 RGCCQ9H4X1 137 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 PPP1R3EQ9H7J1 279 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 TUBG2Q9NRH3 451 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 TAAR3PQ9P1P4 343 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 STEAP1Q9UHE8 339 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF391Q9UJN7 358 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 V9GYS6 101 aa4.41□□□□□ -1.7
HERPUD1-207ENST00000563781 MAP1AP78559 2803 aaPredicted RBP4.4□□□□□ -1.7
HERPUD1-207ENST00000563781 AKAP6Q13023 2319 aa4.4□□□□□ -1.7
HERPUD1-207ENST00000563781 TRBV5-7A0A0A0MS05 114 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 A0A1W2PPW3 197 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 MAGEA13PA6NCF6 341 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TMEM212A6NML5 194 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 OVOL3O00110 214 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 PIN1P1O15428 100 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 MLNRO43193 412 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SYT7O43581 403 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TIMM8AO60220 97 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SC5DO75845 299 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 DHRS3O75911 302 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CST4P01036 141 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TFAP2AP05549 437 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ADH4P08319 380 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RPSAP08865 295 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 HSMCR30P0CW71 290 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RPS2P15880 293 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SELEP16581 610 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF20P17024 532 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CFL1P23528 166 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 PSMB9P28065 219 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TGFBR2P37173 567 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 LIPAP38571 399 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 DDOSTP39656 456 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ALDH3B2P48448 385 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RPS25P62851 125 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 GPR50Q13585 617 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 INSL4Q14641 139 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 NEDD8Q15843 81 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ARMCX4Q5H9R4 360 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 KRBOX4Q5JUW0 171 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SYT6Q5T7P8 510 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 AGAP6Q5VW22 663 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 LIPKQ5VXJ0 399 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CST9LP1Q5W188 147 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TMEM42Q69YG0 159 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 PAMR1Q6UXH9 720 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CLEC9AQ6UXN8 241 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 UNQ9370/PRO34162Q6UXP9 181 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 OR5AS1Q8N127 324 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ZCCHC24Q8N2G6 241 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 BHLHE23Q8NDY6 225 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CCDC54Q8NEL0 328 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 OR8G5Q8NG78 346 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 OR5AK2Q8NH90 309 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 C17orf50Q8WW18 174 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 FCGR1BQ92637 280 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 UFD1Q92890 307 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 TRMT61AQ96FX7 289 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 SLC30A2Q9BRI3 323 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF275Q9NSD4 429 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 CBLN4Q9NTU7 201 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 HHLA2Q9UM44 414 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RHBDD3Q9Y3P4 386 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 ITPR3Q14573 2671 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 OTOGQ6ZRI0 2925 aa4.4□□□□□ -1.71
HERPUD1-207ENST00000563781 RAI1Q7Z5J4 1906 aaPredicted RBP4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 IGKV1-9A0A0C4DH69 117 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF816-ZNF321PA0A0X1KG74 233 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 GGT3PA6NGU5 568 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 A6NIN4 97 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 DHRS7CA6NNS2 312 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 C17orf100A8MU93 164 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 H0YL77 283 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 H7C417 338 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 M0R233 179 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 CCRL2O00421 344 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 CTDSP2O14595 271 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 MTRF1O75570 445 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 NCR1O76036 304 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 IGHV1-46P01743 117 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 CD55P08174 381 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 CA6P23280 308 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 CPT2P23786 658 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 GABRA5P31644 462 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 SOX2P48431 317 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 PPOXP50336 477 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF81P51508 661 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 SELENOVP59797 346 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 SNRPD2P62316 118 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 FABP5Q01469 135 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 RIPPLY1Q0D2K3 151 aa4.39□□□□□ -1.71
HERPUD1-207ENST00000563781 HNRNPA0Q13151 305 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms