RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CD1AP06126 327 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 RPS2P15880 293 aaKnown RBP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 HAAOP46952 286 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 FUT6P51993 359 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 WNT4P56705 351 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 ERVK11-1P61568 191 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 RPS11P62280 158 aaKnown RBP eCLIP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 ACSM1Q08AH1 577 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 KCNJ8Q15842 424 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 MICBQ29980 383 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 GLCCI1Q86VQ1 547 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 DEFB108BQ8NET1 73 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF671Q8TAW3 534 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 MYDGFQ969H8 173 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 SPSB1Q96BD6 273 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 SEH1LQ96EE3 360 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 NEIL1Q96FI4 390 aaPredicted RBP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 PKIBQ9C010 78 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 LPAR2Q9HBW0 351 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 SCN3BQ9NY72 215 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 ERGIC3Q9Y282 383 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 LSM2Q9Y333 95 aaKnown RBP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 NF1P21359 2839 aa5.15□□□□□ -1.59
CNOT1-204ENST00000563130 CUBNO60494 3623 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NAV3Q8IVL0 2385 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SCO2A0A1W2PP80 73 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TRAPPC2LH3BP13 241 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SYNGR1O43759 233 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 RRP9O43818 475 aaKnown RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PGA5P0DJD9 388 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ATF1P18846 271 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PCMT1P22061 227 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GATA3P23771 443 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 RIPPLY3P57055 190 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TAS2R43P59537 309 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 BDH1Q02338 343 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 IL24Q13007 206 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 CR1LQ2VPA4 569 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ESCO2Q56NI9 601 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 FAM120AOSQ5T036 256 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 WDR25Q64LD2 544 aaPredicted RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 STUMQ69YW2 141 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NLRC3Q7RTR2 1065 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SERPINA12Q8IW75 414 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 BOLLQ8N9W6 283 aaKnown RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 POC1AQ8NBT0 407 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR13C3Q8NGS6 347 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ANGPTL6Q8NI99 470 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TRMT10AQ8TBZ6 339 aaKnown RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GPR148Q8TDV2 347 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GHSRQ92847 366 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 CNBD2Q96M20 576 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NRIP2Q9BQI9 281 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SSBP3Q9BWW4 388 aaPredicted RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 DNTTIP1Q9H147 329 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 HES4Q9HCC6 221 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 MMP26Q9NRE1 261 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 CDC42EP3Q9UKI2 254 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SLC7A11Q9UPY5 501 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 POLDIP2Q9Y2S7 368 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ZNF281Q9Y2X9 895 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TPRKBQ9Y3C4 175 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NIPBLQ6KC79 2804 aaeCLIP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ARHGAP32A7KAX9 2087 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 IGHV3OR15-7A0A075B7D8 119 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TRBV5-5A0A0J9YX44 114 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 FAM230AA0A1W2PPH8 454 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 MYL12BO14950 172 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PHF1O43189 567 aaPredicted RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GYPAP02724 150 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ZNF20P17024 532 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PRKACBP22694 351 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GLRA1P23415 457 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 AZGP1P25311 298 aaKnown RBP5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PITPNBP48739 271 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 RBP2P50120 134 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NPY4RP50391 375 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 GNB2P62879 340 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 LCN2P80188 198 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 YIF1BQ5BJH7 314 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ZNF788Q6ZQV5 615 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 PRSS48Q7RTY5 328 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ANGPTL5Q86XS5 388 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR8B3Q8NGG8 313 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR5D14Q8NGL3 314 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR13C9Q8NGT0 318 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NPRL2Q8WTW4 380 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 TMEM106AQ96A25 262 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 BORCS8Q96FH0 119 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OPALINQ96PE5 141 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR5M11Q96RB7 305 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 OR8B2Q96RD0 313 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 MND1Q9BWT6 205 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 ZCCHC4Q9H5U6 513 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 SMURF1Q9HCE7 757 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 RASL12Q9NYN1 266 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 MTCH1Q9NZJ7 389 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 NLKQ9UBE8 527 aa5.14□□□□□ -1.59
CNOT1-204ENST00000563130 LPAR3Q9UBY5 353 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms