RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 PGA5P0DJD9 388 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 ATP6V1B2P21281 511 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 KITLGP21583 273 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 AHCYP23526 432 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 APLNRP35414 380 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 POLR2IP36954 125 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 YAP1P46937 504 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 CDX1P47902 265 aaPredicted RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 SLC7A2P52569 658 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 RAB14P61106 215 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 POU6F2P78424 691 aaPredicted RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 SSBP2P81877 361 aaPredicted RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 SEC23BQ15437 767 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 KCTD19Q17RG1 926 aaPredicted RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 HSD17B12Q53GQ0 312 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 CLLU1Q5K131 121 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 CLEC12AQ5QGZ9 265 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 ARMC4Q5T2S8 1044 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 ZNF691Q5VV52 312 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 TYW3Q6IPR3 259 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 UNQ6126/PRO20091Q6UXV3 157 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 RRM2BQ7LG56 351 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 LHFPL4Q7Z7J7 247 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 LYG2Q86SG7 212 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 OFCC1Q8IZS5 231 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 RDH10Q8IZV5 341 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 KDM8Q8N371 416 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 COMMD1Q8N668 190 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 C1orf52Q8N6N3 182 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 GDPD1Q8N9F7 314 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 FAM71CQ8NEG0 241 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 OR11H1Q8NG94 326 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 OR10AD1Q8NGE0 317 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 ZNF563Q8TA94 476 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 NDNFQ8TB73 568 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 FANK1Q8TC84 345 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 TMEM255BQ8WV15 326 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 TESCQ96BS2 214 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 LGALS12Q96DT0 336 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 OTUB1Q96FW1 271 aaPredicted RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 DGCR6LQ9BY27 220 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 DUSP21Q9H596 190 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 MEAF6Q9HAF1 191 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 NMRAL1Q9HBL8 299 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 OPTCQ9UBM4 332 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 KAAG1Q9UBP8 84 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 DIMT1Q9UNQ2 313 aaKnown RBP4.4□□□□□ -1.71
TCF4-213ENST00000562543 ACOT9Q9Y305 439 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 TMED7Q9Y3B3 224 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 LRP12Q9Y561 859 aa4.4□□□□□ -1.71
TCF4-213ENST00000562543 IQCMA0A1B0GVH7 501 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 TCRBV7S3A2A0A539 114 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 KRBOX1C9JBD0 128 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 MS4A18H0YCH9 400 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SDHDO14521 159 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 OVOL1O14753 267 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 ARPC2O15144 300 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 RGS10O43665 173 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SLC22A5O76082 557 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 DUX4L4P0CJ87 422 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 IRF2P14316 349 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 ZNF43P17038 809 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 EFNA1P20827 205 aaPredicted RBP4.39□□□□□ -1.71
TCF4-213ENST00000562543 CCNOP22674 350 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 PTBP1P26599 531 aaKnown RBP eCLIP4.39□□□□□ -1.712e-7■■■■□ 24.3
TCF4-213ENST00000562543 KIR3DL2P43630 455 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 HAAOP46952 286 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 CCT3P49368 545 aaKnown RBP4.39□□□□□ -1.71
TCF4-213ENST00000562543 SRP9P49458 86 aaKnown RBP4.39□□□□□ -1.71
TCF4-213ENST00000562543 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
TCF4-213ENST00000562543 SCN1BQ07699 218 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 MRPL28Q13084 256 aaKnown RBP4.39□□□□□ -1.71
TCF4-213ENST00000562543 TBCEQ15813 527 aaPredicted RBP4.39□□□□□ -1.71
TCF4-213ENST00000562543 CYP51A1Q16850 503 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 AGKQ53H12 422 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 PDZK1Q5T2W1 519 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SLC16A14Q7RTX9 510 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SPATA12Q7Z6I5 190 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 CCDC190Q86UF4 302 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SLC22A24Q8N4F4 322 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 PARP16Q8N5Y8 322 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 DRAM1Q8N682 238 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 ARL6IP6Q8N6S5 226 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 RNF148Q8N7C7 305 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 CCNYL1Q8N7R7 359 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 C2CD4CQ8TF44 421 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 C4orf3Q8WVX3 66 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 DEDD2Q8WXF8 326 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 SGK3Q96BR1 496 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 POM121L2Q96KW2 1035 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 LRR1Q96L50 414 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 NSMCE2Q96MF7 247 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 CCDC115Q96NT0 180 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 ZNF607Q96SK3 696 aa4.39□□□□□ -1.71
TCF4-213ENST00000562543 THAP7Q9BT49 309 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms