RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 ANKRD61A6NGH8 418 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 SLC1A7O00341 560 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 SYT7O43581 403 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 KRTAP10-3P60369 221 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 CDC42P60953 191 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 ERVK11-1P61568 191 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 RPL31P62899 125 aaKnown RBP8.4□□□□□ -1.06
CLK3-205ENST00000561673 ZNF85Q03923 595 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 ACSM1Q08AH1 577 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 TMED1Q13445 227 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 TMEM200BQ69YZ2 307 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 GDPGP1Q6ZNW5 385 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 C17orf107Q6ZR85 190 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 MKXQ8IYA7 352 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 RDH10Q8IZV5 341 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 PRSS35Q8N3Z0 413 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 C11orf42Q8N5U0 333 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 ZSCAN4Q8NAM6 433 aaPredicted RBP8.4□□□□□ -1.06
CLK3-205ENST00000561673 OR4M1Q8NGD0 313 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 OR5D13Q8NGL4 314 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 LINC01006Q8NI28 216 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 TRMT10AQ8TBZ6 339 aaKnown RBP8.4□□□□□ -1.06
CLK3-205ENST00000561673 RFKQ969G6 155 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 RNF166Q96A37 237 aaPredicted RBP8.4□□□□□ -1.06
CLK3-205ENST00000561673 AJUBAQ96IF1 538 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 CITED1Q99966 193 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 PKIBQ9C010 78 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 SF3B6Q9Y3B4 125 aaKnown RBP8.4□□□□□ -1.06
CLK3-205ENST00000561673 RNF114Q9Y508 228 aa8.4□□□□□ -1.06
CLK3-205ENST00000561673 IGKV1-27A0A075B6S5 117 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 F8VVB4 439 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 F8VWA3 439 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ANGPTL7O43827 346 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ENTPD6O75354 484 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 PAHP00439 452 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 TK1P04183 234 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ALPLP05186 524 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ERVFRD-1P60508 538 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ISL1P61371 349 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 IL24Q13007 206 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 KPNB1Q14974 876 aaKnown RBP8.39□□□□□ -1.07
CLK3-205ENST00000561673 MIDNQ504T8 468 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 TP53I3Q53FA7 332 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 Q6ZSV7 163 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 TRUB1Q8WWH5 349 aaKnown RBP8.39□□□□□ -1.07
CLK3-205ENST00000561673 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 PLEKHA1Q9HB21 404 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 MTCH1Q9NZJ7 389 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 OR14J1Q9UGF5 321 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 GNG8Q9UK08 70 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLK3-205ENST00000561673 SLC7A11Q9UPY5 501 aa8.39□□□□□ -1.07
CLK3-205ENST00000561673 A0A1W2PPH5 198 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 E9PQ18 207 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 H3BNX3 289 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 J3QRE1 110 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 K7N7A8 449 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 EI24O14681 340 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 WIPF1O43516 503 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 CLPXO76031 633 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 INMTO95050 263 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 SERPINA3P01011 423 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 CCL3L1P16619 93 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 PAX6P26367 422 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 KIR3DL2P43630 455 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 FUT6P51993 359 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 PROK1P58294 105 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 SNRPGP62308 76 aaKnown RBP8.38□□□□□ -1.07
CLK3-205ENST00000561673 COL10A1Q03692 680 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 ZIK1Q3SY52 487 aaPredicted RBP8.38□□□□□ -1.07
CLK3-205ENST00000561673 SLC25A30Q5SVS4 291 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 DHRS7BQ6IAN0 325 aaPredicted RBP8.38□□□□□ -1.07
CLK3-205ENST00000561673 BEND2Q8NDZ0 799 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 CCDC54Q8NEL0 328 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 OR5R1Q8NH85 324 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 SLAMF9Q96A28 289 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 RNFT2Q96EX2 444 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 CEP19Q96LK0 163 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 CHST5Q9GZS9 411 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 FAM234AQ9H0X4 552 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 C16orf95Q9H693 158 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 HEXA-AS1Q9H8Q6 139 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 IMPAD1Q9NX62 359 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 USE1Q9NZ43 259 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 ORC6Q9Y5N6 252 aa8.38□□□□□ -1.07
CLK3-205ENST00000561673 LOC107986453A0A1B0GWG9 222 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 DAPL1A0PJW8 107 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 KCNAB3O43448 404 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 GATBO75879 557 aaKnown RBP8.37□□□□□ -1.07
CLK3-205ENST00000561673 TSPAN9O75954 239 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 UBCP0CG48 685 aaKnown RBP8.37□□□□□ -1.07
CLK3-205ENST00000561673 PIPP12273 146 aaPredicted RBP8.37□□□□□ -1.07
CLK3-205ENST00000561673 TGFBR2P37173 567 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 ALDH3A2P51648 485 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms