RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMEM255AQ5JRV8 349 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 AWAT2Q6E213 333 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 LAIR2Q6ISS4 152 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 DNM1P46Q6ZS02 220 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 Q6ZSR3 168 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 GDPD3Q7L5L3 318 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 KRT74Q7RTS7 529 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 ZNF561Q8N587 486 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 C19orf18Q8NEA5 215 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 OR51A2Q8NGJ7 313 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 OR5D18Q8NGL1 313 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 OR10AC1Q8NH08 325 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 PHF21AQ96BD5 680 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 CCL13Q99616 98 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 ZNF649Q9BS31 505 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 CST11Q9H112 138 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 TLNRD1Q9H1K6 362 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 HIF1ANQ9NWT6 349 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 GHRLQ9UBU3 117 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 SLC25A10Q9UBX3 287 aaPredicted RBP8.99□□□□□ -0.97
TPM1-229ENST00000561242 TRBV5-5A0A0J9YX44 114 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 RFPL4AA6NLU0 287 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 RFPL4AL1F8VTS6 287 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 SPRY1O43609 319 aaPredicted RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 SYNGR1O43759 233 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 RHBDL1O75783 438 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 LY6G6DO95868 133 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 LHBP01229 141 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 ACAA1P09110 424 aaPredicted RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 WNT2P09544 360 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 UBBP0CG47 229 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 PGA5P0DJD9 388 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 IGHV4-31P0DP07 118 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 GTF2F2P13984 249 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 ZNF16P17020 682 aaPredicted RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 CALRP27797 417 aaKnown RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 PTGFRP43088 359 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 MTNR1BP49286 362 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 MRPS15P82914 257 aaKnown RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 IRF3Q14653 427 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 CHRFAM7AQ494W8 412 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 SPIN3Q5JUX0 258 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 FAM201AQ5SY85 155 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 METTL11BQ5VVY1 283 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 TEX36Q5VZQ5 186 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 XAF1Q6GPH4 301 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 RBMS3Q6XE24 437 aaKnown RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 PHC2Q8IXK0 858 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 CIARTQ8N365 385 aaPredicted RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 GCSAMQ8N6F7 178 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 DERL3Q96Q80 235 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 SPACA5Q96QH8 159 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 UQCC2Q9BRT2 126 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 C7orf69Q9H7B7 122 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 CDC42EP3Q9UKI2 254 aa8.98□□□□□ -0.97
TPM1-229ENST00000561242 MRPS28Q9Y2Q9 187 aaKnown RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 SETXQ7Z333 2677 aaKnown RBP8.98□□□□□ -0.97
TPM1-229ENST00000561242 ABCA4P78363 2273 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 LOC100506127A0A0U1RQW1 187 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 MAGEA13PA6NCF6 341 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 DVL1O14640 695 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 CRTAPO75718 401 aaPredicted RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 LALBAP00709 142 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 FSTP19883 344 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 SERPINA2P20848 420 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 FPR2P25090 351 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 EDDM3BP56851 147 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 SLC22A6Q4U2R8 563 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 SPRNQ5BIV9 151 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 UBE2UQ5VVX9 321 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 Q71RC1 249 aaPredicted RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 TRAPPC6BQ86SZ2 158 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 BATF2Q8N1L9 274 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 PXT1Q8NFP0 134 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 OR52N4Q8NGI2 321 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 OR13C5Q8NGS8 318 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 NANPQ8TBE9 248 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 RAB40AQ8WXH6 277 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 MSI2Q96DH6 328 aaKnown RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 NUDT16L1Q9BRJ7 211 aaKnown RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 URM1Q9BTM9 101 aaKnown RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 BARHL1Q9BZE3 327 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 PPP1R3EQ9H7J1 279 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 SPACA1Q9HBV2 294 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 RAB9BQ9NP90 201 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 ONECUT1Q9UBC0 465 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 STUB1Q9UNE7 303 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 AUP1Q9Y679 476 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 SIRT4Q9Y6E7 314 aaPredicted RBP8.97□□□□□ -0.97
TPM1-229ENST00000561242 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
TPM1-229ENST00000561242 GABRPO00591 440 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 WNT9BO14905 357 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 PHF1O43189 567 aaPredicted RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 ANGPTL7O43827 346 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 GPX5O75715 221 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 HAND1O96004 215 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 PSG2P11465 335 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms