RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GFOD2Q3B7J2 385 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 C18orf65Q6ZTR6 163 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 FAM57BQ71RH2 274 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 SLC37A3Q8NCC5 494 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 Q8NFD4 153 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 PROKR2Q8NFJ6 384 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 OR11H6Q8NGC7 330 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 OR51D1Q8NGF3 324 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 OR51L1Q8NGJ5 315 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 OR13D1Q8NGV5 346 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 OR2T27Q8NH04 317 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 TSSK6Q9BXA6 273 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 TBC1D23Q9NUY8 699 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 ALMS1Q8TCU4 4167 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 RFPL4AA6NLU0 287 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 RFPL4AL1F8VTS6 287 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 IDH3BO43837 385 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 MITFO75030 526 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 CST4P01036 141 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 CLUP10909 449 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 CFL1P23528 166 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 DAPP51397 102 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 OR12D2P58182 307 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 ACTR3P61158 418 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 GRB2P62993 217 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 LINC01590Q5TEZ4 76 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 AMIGO2Q86SJ2 522 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 CALHM1Q8IU99 346 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 FTMTQ8N4E7 242 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 PIGCQ92535 297 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 P2RX4Q99571 388 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 ABCB9Q9NP78 766 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 HERC2O95714 4834 aa10.18□□□□□ -0.78
RABGGTA-213ENST00000560127 SH2D7A6NKC9 451 aaPredicted RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF593O00488 134 aaPredicted RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 AMY1AP04745 511 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 AMY2AP04746 511 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 HOXB6P17509 224 aaKnown RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 CHATP28329 748 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 EPHA2P29317 976 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 SLC15A1P46059 708 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 GPM6AP51674 278 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 RPL23AP62750 156 aaKnown RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 DYNC1I2Q13409 638 aaKnown RBP10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 SNCBQ16143 134 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 RPL13AP3Q6NVV1 102 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 ACP7Q6ZNF0 438 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 C8orf86Q6ZUL3 223 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 OSR2Q8N2R0 312 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF511Q8NB15 262 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 OR52L1Q8NGH7 329 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 PYDC1Q8WXC3 89 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 GABARAPL1Q9H0R8 117 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 OR10A2Q9H208 303 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 MED20Q9H944 212 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 DNAJC27Q9NZQ0 273 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 AP4S1Q9Y587 144 aa10.17□□□□□ -0.78
RABGGTA-213ENST00000560127 MEX3AA1L020 520 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 EBAG9O00559 213 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 GNGT2O14610 69 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 E2F6O75461 281 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 GYPBP06028 91 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 PIPP12273 146 aaPredicted RBP10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 CD24P25063 80 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 HSD11B1P28845 292 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 PRDX2P32119 198 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 MYCNOSP40205 109 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 TEX30Q5JUR7 227 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 TMEM236Q5W0B7 351 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 OR2W3Q7Z3T1 314 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 TIGD4Q8IY51 512 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 ZDHHC23Q8IYP9 409 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 OR2T33Q8NG76 320 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 OR2T4Q8NH00 348 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF671Q8TAW3 534 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 NRBF2Q96F24 287 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 LIN7BQ9HAP6 207 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 SLC25A19Q9HC21 320 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 PALMDQ9NP74 551 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 BRD7Q9NPI1 651 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 CMC2Q9NRP2 79 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 RASL12Q9NYN1 266 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
RABGGTA-213ENST00000560127 RYR1P21817 5038 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 PSMB11A5LHX3 300 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 FAM183AA6NL82 134 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF732B4DXR9 585 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 H3BUI4 141 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 M0R129 80 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 SLC1A7O00341 560 aa10.15□□□□□ -0.78
RABGGTA-213ENST00000560127 RBP4P02753 201 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms