RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 DCAF12L2Q5VW00 463 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF529Q6P280 563 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 LRRC28Q86X40 367 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-225ENST00000560005 ORAI1Q96D31 301 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 ADAT3Q96EY9 351 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-225ENST00000560005 CPNE2Q96FN4 548 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-225ENST00000560005 DIRAS2Q96HU8 199 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 LYZL4Q96KX0 146 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF75AQ96N20 296 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 TECTBQ96PL2 329 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 UQCC2Q9BRT2 126 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 UNKLQ9H9P5 680 aaKnown RBP17.29■□□□□ 0.36
PSEN1-225ENST00000560005 DUSP13Q9UII6 198 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 SLC17A2O00624 439 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 SULT1B1O43704 296 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 ICMTO60725 284 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 CDC14BO60729 498 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 APOA1P02647 267 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 OCMP0CE72 109 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF14P17017 642 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-225ENST00000560005 ATF1P18846 271 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 FPR2P25090 351 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 ALKBH6Q3KRA9 238 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 MFSD4AQ8N468 514 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 TRMT10AQ8TBZ6 339 aaKnown RBP17.28■□□□□ 0.36
PSEN1-225ENST00000560005 RAB39BQ96DA2 213 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 DUX5Q96PT3 197 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 PIGLQ9Y2B2 252 aa17.28■□□□□ 0.36
PSEN1-225ENST00000560005 ZFP36P26651 326 aaKnown RBP17.27■□□□□ 0.36
PSEN1-225ENST00000560005 RPS23P62266 143 aaKnown RBP17.27■□□□□ 0.36
PSEN1-225ENST00000560005 RAB11BQ15907 218 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 C1orf100Q5SVJ3 147 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 GLYATL3Q5SZD4 288 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 C16orf87Q6PH81 154 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 RBMS3Q6XE24 437 aaKnown RBP17.27■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF584Q8IVC4 421 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 FTMTQ8N4E7 242 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 CSNK2A3Q8NEV1 391 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 OR6M1Q8NGM8 313 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 GFI1Q99684 422 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 C7orf69Q9H7B7 122 aa17.27■□□□□ 0.36
PSEN1-225ENST00000560005 FABP12A6NFH5 140 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 FAM25AB3EWG3 89 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 FAM25CB3EWG5 89 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 FAM25GB3EWG6 89 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 FSHBP01225 129 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 SLC2A2P11168 524 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-225ENST00000560005 PRKACBP22694 351 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 GSK3AP49840 483 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 OR8B8Q15620 311 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 HES5Q5TA89 166 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 BAIAP2L2Q6UXY1 529 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 MRPL21Q7Z2W9 205 aaKnown RBP17.26■□□□□ 0.35
PSEN1-225ENST00000560005 LAX1Q8IWV1 398 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 SIGLECL1Q8N7X8 197 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 SAMD12Q8N8I0 201 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 RAB40AQ8WXH6 277 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 MIXL1Q9H2W2 232 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 OPN4Q9UHM6 478 aa17.26■□□□□ 0.35
PSEN1-225ENST00000560005 hCG_38984A0A1B0GV85 526 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 HPGDSO60760 199 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 TPPPO94811 219 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 PRTN3P24158 256 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 HTR2CP28335 458 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 FAM3AP98173 230 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 NKPD1Q17RQ9 610 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 UBE2NLQ5JXB2 153 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 CLVS2Q5SYC1 327 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 OR13C9Q8NGT0 318 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 C15orf40Q8WUR7 153 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 DVL3Q92997 716 aaPredicted RBP17.25■□□□□ 0.35
PSEN1-225ENST00000560005 LIN7BQ9HAP6 207 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 CYSLTR2Q9NS75 346 aa17.25■□□□□ 0.35
PSEN1-225ENST00000560005 ARHGAP32A7KAX9 2087 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 ZNF816-ZNF321PA0A0X1KG74 233 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 DNAJC9-AS1A6NH13 148 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 IGHV2-5P01817 119 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 RAD52P43351 418 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 CCL8P80075 99 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 ZNF92Q03936 586 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 CNN3Q15417 329 aaKnown RBP17.24■□□□□ 0.35
PSEN1-225ENST00000560005 FAM189A2Q15884 450 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 ASPHD2Q6ICH7 369 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 FAM131AQ6UXB0 335 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 JAGN1Q8N5M9 183 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 PNLDC1Q8NA58 520 aaKnown RBP17.24■□□□□ 0.35
PSEN1-225ENST00000560005 OR2AE1Q8NHA4 323 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 SPSB1Q96BD6 273 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 CCDC32Q9BV29 185 aa17.24■□□□□ 0.35
PSEN1-225ENST00000560005 SNRPBP14678 240 aaKnown RBP17.23■□□□□ 0.35
PSEN1-225ENST00000560005 CNIH2Q6PI25 160 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 KRT74Q7RTS7 529 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 GDPD1Q8N9F7 314 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 DNAAF1Q8NEP3 725 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 PTX4Q96A99 478 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 FAM3DQ96BQ1 224 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 S100A16Q96FQ6 103 aaKnown RBP17.23■□□□□ 0.35
PSEN1-225ENST00000560005 ABCG5Q9H222 651 aa17.23■□□□□ 0.35
PSEN1-225ENST00000560005 TAAR3PQ9P1P4 343 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms