RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ATP1B3P54709 279 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 SNU13P55769 128 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 DLX1P56177 255 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 CAV3P56539 151 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 BPIFB3P59826 476 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 NANOS3P60323 173 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 RAB40BQ12829 278 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 IL24Q13007 206 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 KLRD1Q13241 179 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ALKBH1Q13686 389 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 BLMHQ13867 455 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 GALEQ14376 348 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 UBE2V2Q15819 145 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 SMN1Q16637 294 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 KLHL22Q53GT1 634 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 Q6ZSR3 168 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 SLC25A26Q70HW3 274 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 KIR3DL3Q8N743 410 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ASCC1Q8N9N2 400 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 LY6G5BQ8NDX9 201 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 SETD9Q8NE22 299 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 OR52I1Q8NGK6 324 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 OR13C9Q8NGT0 318 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 OR10AC1Q8NH08 325 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 CNIH3Q8TBE1 160 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 TSEN15Q8WW01 171 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 C10orf35Q96D05 121 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ADAT3Q96EY9 351 aaPredicted RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 PELI1Q96FA3 418 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 CEP19Q96LK0 163 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 RDH12Q96NR8 316 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 NRIP2Q9BQI9 281 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 PKIBQ9C010 78 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 COMMD4Q9H0A8 199 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ISG20L2Q9H9L3 353 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 NEK6Q9HC98 313 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 INPP5EQ9NRR6 644 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ERVK13-1Q9NX77 482 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ZNF222Q9UK12 451 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 FAM96BQ9Y3D0 163 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 MAB21L2Q9Y586 359 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 IGKV1-27A0A075B6S5 117 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 TRBV23-1A0A0A0MS06 115 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 A0A0U1RQK1 487 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PPH5 198 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 TMEM89A2RUT3 159 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 IGHA1P01876 353 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 CRYBA1P05813 215 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 RNASE1P07998 156 aaKnown RBP6.74□□□□□ -1.33
SNX1-207ENST00000559401 HCKP08631 526 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 CCDC159P0C7I6 412 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 ATF1P18846 271 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 PRKACBP22694 351 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 MPZP25189 248 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 CCR9P51686 369 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 GBX2P52951 348 aaPredicted RBP6.74□□□□□ -1.33
SNX1-207ENST00000559401 MTCP1P56278 107 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 SLC9A3R2Q15599 337 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 TTC23Q5W5X9 447 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 FDX2Q6P4F2 183 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 FIP1L1Q6UN15 594 aaKnown RBP6.74□□□□□ -1.33
SNX1-207ENST00000559401 EGFL6Q8IUX8 553 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 MKXQ8IYA7 352 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 SYS1Q8N2H4 156 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 ZNF561Q8N587 486 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 DHRSXQ8N5I4 330 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 CD177Q8N6Q3 437 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 OR4M1Q8NGD0 313 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 OR51A4Q8NGJ6 313 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 OR5D18Q8NGL1 313 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 OR5AK2Q8NH90 309 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 C8orf46Q8TAG6 207 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 APH1BQ8WW43 257 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 EMG1Q92979 244 aaKnown RBP6.74□□□□□ -1.33
SNX1-207ENST00000559401 RFT1Q96AA3 541 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 SDSLQ96GA7 329 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 OPALINQ96PE5 141 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 NOX4Q9NPH5 578 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 C19orf12Q9NSK7 152 aa6.74□□□□□ -1.33
SNX1-207ENST00000559401 CAB39Q9Y376 341 aaPredicted RBP6.74□□□□□ -1.33
SNX1-207ENST00000559401 TRBV2A0A0J9YWF9 115 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 IRGMA1A4Y4 181 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 TMEM212A6NML5 194 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 OR4C45A6NMZ5 311 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 E9PI62 339 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 M0R1W7 72 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 NPFFO15130 113 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 SPRY1O43609 319 aaPredicted RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 RRP9O43818 475 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 ANGPTL7O43827 346 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 NOS1APO75052 506 aaPredicted RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 WBP4O75554 376 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 PAHP00439 452 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 KNG1P01042 644 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 ISG15P05161 165 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 MELTFP08582 738 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 HKR1P10072 659 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 CALCBP10092 127 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms