RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 KCNK15Q9H427 330 aa9.09□□□□□ -0.95
TPM1-217ENST00000559108 RBFOX1Q9NWB1 397 aaKnown RBP9.09□□□□□ -0.95
TPM1-217ENST00000559108 ZNF222Q9UK12 451 aa9.09□□□□□ -0.95
TPM1-217ENST00000559108 SLC7A11Q9UPY5 501 aa9.09□□□□□ -0.95
TPM1-217ENST00000559108 A0A1W2PP11 408 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 NOS1APO75052 506 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 RGS9O75916 674 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 FSTL3O95633 263 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 LY6G6DO95868 133 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 MAS1P04201 325 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 SFTPBP07988 381 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 HCKP08631 526 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 INHBBP09529 407 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 CD99P14209 185 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 JUNBP17275 347 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 RAB3AP20336 220 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 BCL3P20749 454 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 TGFBR1P36897 503 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 RBP2P50120 134 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 MZT1Q08AG7 82 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 PDZK1IP1Q13113 114 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 TMEM155Q4W5P6 130 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 DDI2Q5TDH0 399 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 METAP1DQ6UB28 335 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 ACP7Q6ZNF0 438 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 LHFPL2Q6ZUX7 228 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 Q71RC1 249 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 NR2C2APQ86WQ0 139 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 ZNF573Q86YE8 665 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 CD177Q8N6Q3 437 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 FAM216BQ8N7L0 139 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 OR4D6Q8NGJ1 314 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 ANGPTL6Q8NI99 470 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 FCGR1BQ92637 280 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 HPS1Q92902 700 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 RAB1CQ92928 201 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 YIPF6Q96EC8 236 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 TECTBQ96PL2 329 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 NR1H4Q96RI1 486 aaPredicted RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 GAL3ST1Q99999 423 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 ZNF665Q9H7R5 613 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 PATZ1Q9HBE1 687 aaKnown RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 LPAR2Q9HBW0 351 aa9.08□□□□□ -0.96
TPM1-217ENST00000559108 ANK3Q12955 4377 aaKnown RBP9.08□□□□□ -0.96
TPM1-217ENST00000559108 A0A087WXM4 84 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 TRDV1A0A1B0GX56 115 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 LRRC30A6NM36 301 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 IFNL4K9M1U5 179 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 CCRL2O00421 344 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 PHF1O43189 567 aaPredicted RBP9.07□□□□□ -0.96
TPM1-217ENST00000559108 CDRT1O95170 752 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 SERPINA3P01011 423 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 ALDOBP05062 364 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 CD2P06729 351 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 WNT2P09544 360 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 CD37P11049 281 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 PSG2P11465 335 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 PRKACBP22694 351 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 GLRA1P23415 457 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 GADD45AP24522 165 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 BDKRB2P30411 391 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 ATP1B3P54709 279 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 OR10A3P58181 314 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 MS4A15Q8N5U1 240 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 OR10K1Q8NGX5 313 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 DACT3Q96B18 629 aaPredicted RBP9.07□□□□□ -0.96
TPM1-217ENST00000559108 TIMD4Q96H15 378 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 GAFA1Q96PS6 74 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 CCL13Q99616 98 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 TMEM138Q9NPI0 162 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 NLKQ9UBE8 527 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 FOXJ3Q9UPW0 622 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 MAB21L2Q9Y586 359 aa9.07□□□□□ -0.96
TPM1-217ENST00000559108 SMIM30A4D0T7 59 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 OR2AT4A6NND4 320 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 KDM4BO94953 1096 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 TFAP2AP05549 437 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 ACAA1P09110 424 aaPredicted RBP9.06□□□□□ -0.96
TPM1-217ENST00000559108 IRF2P14316 349 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 DUSP1P28562 367 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 SNU13P55769 128 aaKnown RBP9.06□□□□□ -0.96
TPM1-217ENST00000559108 PAX2Q02962 417 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 DGUOKQ16854 277 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 HSD17B12Q53GQ0 312 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 C22orf42Q6IC83 251 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 ASCL4Q6XD76 172 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 ZNF788Q6ZQV5 615 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 DCDC5Q6ZRR9 648 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 RTN4RL2Q86UN3 420 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 SATL1Q86VE3 508 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 C1orf87Q8N0U7 546 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 OR51F2Q8NH61 342 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 TNFAIP8L1Q8WVP5 186 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 CEP19Q96LK0 163 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 CENPOQ9BU64 300 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 NAA50Q9GZZ1 169 aaKnown RBP9.06□□□□□ -0.96
TPM1-217ENST00000559108 CNTD2Q9H8S5 307 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 ELL3Q9HB65 397 aaPredicted RBP9.06□□□□□ -0.96
TPM1-217ENST00000559108 MMP26Q9NRE1 261 aa9.06□□□□□ -0.96
TPM1-217ENST00000559108 TXNL4BQ9NX01 149 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms