RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PNKDQ8N490 385 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 ZNF676Q8N7Q3 588 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 OR51A4Q8NGJ6 313 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 OR2G2Q8NGZ5 317 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 ANGPTL6Q8NI99 470 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 DACT3Q96B18 629 aaPredicted RBP9.91□□□□□ -0.82
TPM1-216ENST00000558910 SPACA5Q96QH8 159 aa9.91□□□□□ -0.82
TPM1-216ENST00000558910 SMPD3Q9NY59 655 aaPredicted RBP9.91□□□□□ -0.82
TPM1-216ENST00000558910 IGKV1-27A0A075B6S5 117 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 A0A0A6YYJ9 748 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 ERICH4A6NGS2 130 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 J3QT63 122 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 DLGAP1O14490 977 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 HOXA3O43365 443 aaPredicted RBP9.9□□□□□ -0.82
TPM1-216ENST00000558910 FSTL3O95633 263 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 SERPINA3P01011 423 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 GABRB1P18505 474 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 OMGP23515 440 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 CPT2P23786 658 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 CDONQ4KMG0 1287 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 FAM76BQ5HYJ3 339 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 ACP7Q6ZNF0 438 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 ZNF788Q6ZQV5 615 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 CD177Q8N6Q3 437 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 OR52I1Q8NGK6 324 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 OR13C3Q8NGS6 347 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 RHOXF1Q8NHV9 184 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 ADAT3Q96EY9 351 aaPredicted RBP9.9□□□□□ -0.82
TPM1-216ENST00000558910 PELI1Q96FA3 418 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 BORCS8Q96FH0 119 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 MED30Q96HR3 178 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 Q96MT0 163 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 KAAG1Q9UBP8 84 aa9.9□□□□□ -0.82
TPM1-216ENST00000558910 EXOGQ9Y2C4 368 aaKnown RBP9.9□□□□□ -0.82
TPM1-216ENST00000558910 E9PI62 339 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 F8VVB4 439 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 F8VWA3 439 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 J3QRE1 110 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 SIGLEC5O15389 551 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 SPRY1O43609 319 aaPredicted RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 FADS2O95864 444 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 ACAA1P09110 424 aaPredicted RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 UBCP0CG48 685 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 MMP9P14780 707 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 DUSP1P28562 367 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 PRDX2P32119 198 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 TGM4P49221 684 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 GTF2A1P52655 376 aaPredicted RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 ALKBH1Q13686 389 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 SMIM21Q3B7S5 101 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 ZBTB37Q5TC79 503 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 TMEM244Q5VVB8 128 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 TMEM42Q69YG0 159 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 USP43Q70EL4 1123 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 SLC25A26Q70HW3 274 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 RNF144BQ7Z419 303 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 ASCC1Q8N9N2 400 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 POC1AQ8NBT0 407 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 OR5D18Q8NGL1 313 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 OR13C9Q8NGT0 318 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 GATAD2BQ8WXI9 593 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 C12orf43Q96C57 262 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 C1orf147Q96MC9 270 aaPredicted RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 NKX3-1Q99801 234 aaPredicted RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 DCTN5Q9BTE1 182 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 SIRPDQ9H106 197 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 ING3Q9NXR8 418 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 RPL36Q9Y3U8 105 aaKnown RBP9.89□□□□□ -0.83
TPM1-216ENST00000558910 MAB21L2Q9Y586 359 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 PCDHGB1Q9Y5G3 927 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 TENM1Q9UKZ4 2725 aa9.89□□□□□ -0.83
TPM1-216ENST00000558910 A0A0U1RQK1 487 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 E9PQ18 207 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 H0YAE9 185 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 MPZL2O60487 215 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 GATBO75879 557 aaKnown RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 ECDO95905 644 aaPredicted RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 LIPFP07098 398 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 PGA5P0DJD9 388 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 CCL1P22362 96 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 PAX6P26367 422 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 SOX2P48431 317 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 MTCP1P56278 107 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 ACTA2P62736 377 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 ACTG2P63267 376 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 GALEQ14376 348 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 CNN3Q15417 329 aaKnown RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 SLC9A3R2Q15599 337 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 SLC25A30Q5SVS4 291 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 EGFL6Q8IUX8 553 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 CMTM4Q8IZR5 234 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 TSEN15Q8WW01 171 aaKnown RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 EMG1Q92979 244 aaKnown RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 MRPL48Q96GC5 212 aaKnown RBP9.88□□□□□ -0.83
TPM1-216ENST00000558910 PDCD1LG2Q9BQ51 273 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms