RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ZDHHC8Q9ULC8 765 aa10.79□□□□□ -0.68
LDLR-205ENST00000557933 HS3ST3A1Q9Y663 406 aa10.79□□□□□ -0.68
LDLR-205ENST00000557933 SVILO95425 2214 aa10.79□□□□□ -0.68
LDLR-205ENST00000557933 NCOR1O75376 2440 aa10.79□□□□□ -0.68
LDLR-205ENST00000557933 FAM24AA6NFZ4 105 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 A6NIZ1 184 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 IFNA4P05014 189 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 CHRM2P08172 466 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 CD37P11049 281 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 RAP1BP61224 184 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 RAP1AP62834 184 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 VAX1Q5SQQ9 334 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 RPUSD3Q6P087 351 aaKnown RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 PEG10Q86TG7 708 aaKnown RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 LHFPL1Q86WI0 220 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 DEFB123Q8N688 67 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 FREM1Q5H8C1 2179 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 DEDDO75618 318 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 GSTP1P09211 210 aaKnown RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF43P17038 809 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 SNCAP37840 140 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 ABCA11PQ4W5N1 156 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 TMEM234Q8WY98 164 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF385AQ96PM9 386 aaKnown RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF251Q9BRH9 671 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 KCNJ16Q9NPI9 418 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 TIMM10BQ9Y5J6 103 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 SMG1Q96Q15 3661 aaKnown RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 CCDC187A0A096LP49 1063 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 A0A1W2PPC4 97 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 A0A1W2PR80 420 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 PET100P0DJ07 73 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 THBS4P35443 961 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF41P51814 821 aaPredicted RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 MTCP1P56278 107 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 HSD11B2P80365 405 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 IL15RAQ13261 267 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 IZUMO4Q1ZYL8 232 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF529Q6P280 563 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 RTN4IP1Q8WWV3 396 aaPredicted RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 CLDN23Q96B33 292 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 GNRHR2Q96P88 292 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 C1orf123Q9NWV4 160 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 ZNF107Q9UII5 783 aaPredicted RBP10.78□□□□□ -0.68
LDLR-205ENST00000557933 R4GN57 208 aa10.78□□□□□ -0.68
LDLR-205ENST00000557933 RP1L1Q8IWN7 2480 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 PHF1O43189 567 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 IFNA21P01568 189 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 IGHG1P01857 330 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 PGA4P0DJD7 388 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 PGA3P0DJD8 388 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 GLP1RP43220 463 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 BLKP51451 505 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 CCR5P51681 352 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 KIAA0141Q14154 515 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 C5orf46Q6UWT4 87 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 DDIT4LQ96D03 193 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 SAT2Q96F10 170 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 NELFAQ9H3P2 528 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 C19orf12Q9NSK7 152 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 PLEK2Q9NYT0 353 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 TMEM131Q92545 1883 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 GEMIN2O14893 280 aaKnown RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 IGHV3-9P01782 118 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 KLK3P07288 261 aaPredicted RBP10.77□□□□□ -0.69
LDLR-205ENST00000557933 UNQ6494/PRO21346Q6UXR6 183 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 FBXW12Q6X9E4 464 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 NOXO1Q8NFA2 376 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 POC1BQ8TC44 478 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 PIGQQ9BRB3 760 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 PRO1933Q9H354 126 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 AK3Q9UIJ7 227 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 MEMO1Q9Y316 297 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 LRP4O75096 1905 aa10.77□□□□□ -0.69
LDLR-205ENST00000557933 DNAJC13O75165 2243 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 UBE2CO00762 179 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 OR2C1O95371 312 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 MT-ND4LP03901 98 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 HEXAP06865 529 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 ZNF674Q2M3X9 581 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 SLC22A25Q6T423 547 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 HIST2H3AQ71DI3 136 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 OR14K1Q8NGZ2 314 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 SLC22A8Q8TCC7 542 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 NTNG2Q96CW9 530 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 PFDN5Q99471 154 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 OCSTAMPQ9BR26 566 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 PNRC2Q9NPJ4 139 aaKnown RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 LIPGQ9Y5X9 500 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 KNTC1P50748 2209 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 JTBO76095 146 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms