RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ZNF611Q8N823 705 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ZDHHC22Q8N966 263 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ZIC4Q8N9L1 334 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 HSD17B11Q8NBQ5 300 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR1S2Q8NGQ3 325 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF488Q96MN9 340 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR5AC2Q9NZP5 309 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 AK3Q9UIJ7 227 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 PCDHB10Q9UN67 800 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 A6NLC8 198 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 K7EPK0 472 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 MED6O75586 246 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 TSPAN9O75954 239 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2F2O95006 317 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 GSK3AP49840 483 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2F1Q13607 317 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ARRDC1Q8N5I2 433 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 FAM71E2Q8N5Q1 922 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR5M9Q8NGP3 310 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 RTN4IP1Q8WWV3 396 aaPredicted RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 TAAR9Q96RI9 348 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ADAT1Q9BUB4 502 aaKnown RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 CRHP06850 196 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 CLINT1Q14677 625 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF169Q14929 603 aaPredicted RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 RAB35Q15286 201 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 TMEM65Q6PI78 240 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OSR2Q8N2R0 312 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR10C1Q96KK4 312 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 OR14J1Q9UGF5 321 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 LDLRAD4O15165 306 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 RBMXL2O75526 392 aaKnown RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 CBX5P45973 191 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 PPA1Q15181 289 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 FAM27BQ5VT28 67 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 ZSCAN4Q8NAM6 433 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 PNRC2Q9NPJ4 139 aaKnown RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 BCL2L11O43521 198 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 CD74P04233 296 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 NPBWR2P48146 333 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 LPCAT3Q6P1A2 487 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 SULT4A1Q9BR01 284 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 GPR35Q9HC97 309 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 CEP295Q9C0D2 2601 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 F12P00748 615 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 PMP22Q01453 160 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 OR11L1Q8NGX0 322 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 CPNE4Q96A23 557 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF286AQ9HBT8 521 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
TMEM55B-207ENST00000557041 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 NPIPB13A6NJU9 1138 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF732B4DXR9 585 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 B8ZZF3 427 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 NPIPB4C9JG80 1138 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 TRAPPC2LH3BP13 241 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 HSD17B6O14756 317 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 SFT2D2O95562 160 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 APLNRP35414 380 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 MPPED2Q15777 294 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 SLC25A53Q5H9E4 307 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 OR1S1Q8NH92 325 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2H1Q9GZK4 316 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 BCO1Q9HAY6 547 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 PROK2Q9HC23 129 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 C1orf123Q9NWV4 160 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 LUZP4Q9P127 313 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 KIF25Q9UIL4 384 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 FAM96BQ9Y3D0 163 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 SERPINE3A8MV23 424 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 TOR1AO14656 332 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 LRP3O75074 770 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 NGFP01138 241 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 IGHEP01854 428 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 PET100P0DJ07 73 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 PRKACAP17612 351 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 HIKESHIQ53FT3 197 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 HES3Q5TGS1 186 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2T2Q6IF00 324 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms