RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 STT3BQ8TCJ2 826 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ST6GALNAC6Q969X2 333 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SMIM19Q96E16 107 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 DNAJA3Q96EY1 480 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TSPAN32Q96QS1 320 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 C20orf85Q9H1P6 137 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 KLK10O43240 276 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CST4P01036 141 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SERPINA7P05543 415 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CD14P08571 375 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CST2P09228 141 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ANKRD34CP0C6C1 535 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 FAM157BP0CG42 384 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 TFPIP10646 304 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ELK1P19419 428 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ARR3P36575 388 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 GATA4P43694 442 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 NANOS3P60323 173 aaKnown RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SRSF6Q13247 344 aaKnown RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 IL11RAQ14626 422 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SLC25A35Q3KQZ1 300 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ALG10Q5BKT4 473 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 GCSAMLQ5JQS6 135 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CST9LP1Q5W188 147 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PMS2CLQ68D20 193 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 HBMQ6B0K9 141 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SLC35F2Q8IXU6 374 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 MUC15Q8N387 334 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 FTMTQ8N4E7 242 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CCDC71LQ8N9Z2 235 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 NFAM1Q8NET5 270 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 RNF133Q8WVZ7 376 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 C11orf40Q8WZ69 217 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 C20orf24Q9BUV8 137 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ULBP2Q9BZM5 246 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 C11orf54Q9H0W9 315 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 RAB18Q9NP72 206 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 TAS2R5Q9NYW4 299 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PILRBQ9UKJ0 227 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 KLHDC2Q9Y2U9 406 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 IGHV5-10-1A0A0J9YXX1 117 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 H7C1C5 153 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 BGLAPP02818 100 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 RAB40ALP0C0E4 278 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 GRPRP30550 384 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CDX1P47902 265 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ELLP55199 621 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 TAS2R43P59537 309 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SEC61GP60059 68 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 LCN6P62502 163 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PLCXD2Q0VAA5 305 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 IL10RAQ13651 578 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 INPP5JQ15735 1006 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 LYSMD4Q5XG99 296 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF774Q6NX45 483 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SFXN4Q6P4A7 337 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 LEG1Q6P5S2 330 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 LYG1Q8N1E2 194 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 BMPERQ8N8U9 685 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 RGP1Q92546 391 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF775Q96BV0 537 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PDCD1LG2Q9BQ51 273 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ANKRD10Q9NXR5 420 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 RNF212BA8MTL3 300 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR2F2O95006 317 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 EIF4EP06730 217 aaKnown RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 FAM87AP0C7U9 286 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 PLP1P60201 277 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CTXN1P60606 82 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 SIRPAP78324 504 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OPCMLQ14982 345 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ACSM3Q53FZ2 586 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM268Q5VZI3 342 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 LCN10Q6JVE6 187 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CEACAM19Q7Z692 300 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR2Z1Q8NG97 314 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR5D13Q8NGL4 314 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR6K6Q8NGW6 343 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR4K15Q8NH41 348 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF563Q8TA94 476 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 ASB10Q8WXI3 467 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 OR6C1Q96RD1 312 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 GFI1Q99684 422 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CHRDL1Q9BU40 450 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 APMAPQ9HDC9 416 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 CGGBP1Q9UFW8 167 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-210ENST00000556422 MUC6Q6W4X9 2439 aa4.49□□□□□ -1.69
TMEM260-210ENST00000556422 TGIF2-C20orf24A0A0A6YYL0 155 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1W2PPK0 400 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1W2PRX2 142 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 C9orf172C9J069 976 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 PIN1P1O15428 100 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 TOXO94900 526 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 ABHD16AO95870 558 aa4.48□□□□□ -1.69
TMEM260-210ENST00000556422 GPANK1O95872 356 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms