RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ACADSP16219 412 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 NAA10P41227 235 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 OR3A4PP47883 348 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 DAP3P51398 398 aaKnown RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CRIP2P52943 208 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CAV3P56539 151 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 LINC01547P58512 204 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CAV1Q03135 178 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 MFGE8Q08431 387 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 HAGHQ16775 308 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CXorf66Q5JRM2 361 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 RNLSQ5VYX0 342 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 OR4F3Q6IEY1 312 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CPLX4Q7Z7G2 160 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 LHFPL4Q7Z7J7 247 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 RANBP3LQ86VV4 465 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 LYPD6Q86Y78 171 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 GCSAMQ8N6F7 178 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 FAM216BQ8N7L0 139 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 FBXO25Q8TCJ0 367 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 SPRYD4Q8WW59 207 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 STMN2Q93045 179 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 SLC35A5Q9BS91 424 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 TMEM43Q9BTV4 400 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 DNTTIP1Q9H147 329 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 RNPEPL1Q9HAU8 725 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 CHCHD3Q9NX63 227 aaKnown RBP4.51□□□□□ -1.69
ATXN3-223ENST00000553686 TMEM216Q9P0N5 145 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 P2RX2Q9UBL9 471 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 UGT2A1Q9Y4X1 527 aa4.51□□□□□ -1.69
ATXN3-223ENST00000553686 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 IGHV3OR15-7A0A075B7D8 119 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 LRRN3E7EW58 273 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 PRSS1P07477 247 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 SPNP16150 400 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 MSR1P21757 451 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 COX7A1P24310 79 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 CDX1P47902 265 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 GLIPR1P48060 266 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 POU3F4P49335 361 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 SLC25A1P53007 311 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 CLDN8P56748 225 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 NCALDP61601 193 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 SLC34A1Q06495 639 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 CD47Q08722 323 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 MAD2L1Q13257 205 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 UGT3A2Q3SY77 523 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 C9orf152Q5JTZ5 239 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 C10orf107Q8IVU9 208 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 FAM71E2Q8N5Q1 922 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 FNDC5Q8NAU1 212 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 SLC24A4Q8NFF2 622 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 OR8J2Q8NGG1 315 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 OR6Q1Q8NGQ2 317 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 OR5K1Q8NHB7 308 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 TSEN15Q8WW01 171 aaKnown RBP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 GHITMQ9H3K2 345 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 TUBB1Q9H4B7 451 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 THUMPD1Q9NXG2 353 aaKnown RBP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 ATPIF1Q9UII2 106 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-223ENST00000553686 GAB2Q9UQC2 676 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 NDUFAF1Q9Y375 327 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 FIS1Q9Y3D6 152 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 DNAJC15Q9Y5T4 150 aa4.5□□□□□ -1.69
ATXN3-223ENST00000553686 OR6C6A6NF89 314 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 BLOC1S5-TXNDC5H3BN57 136 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 CCRL2O00421 344 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 KRT75O95678 551 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 AMBPP02760 352 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ARG1P05089 322 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 CFC1P0CG37 223 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 DUX4L4P0CJ87 422 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 MYL2P10916 166 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 UMPSP11172 480 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 CA6P23280 308 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 BRS3P32247 399 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ARHGDIBP52566 201 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 DNAJB13P59910 316 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 SPIBQ01892 262 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 IL18R1Q13478 541 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
ATXN3-223ENST00000553686 PCK2Q16822 640 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 C6orf136Q5SQH8 315 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 TEX38Q6PEX7 206 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 CEMP1Q6PRD7 247 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-223ENST00000553686 SLC25A47Q6Q0C1 308 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ZNF826PQ6ZT77 177 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 DYNAPQ8N1N2 210 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 DRAM1Q8N682 238 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 OR1F12Q8NHA8 337 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 RRNAD1Q96FB5 475 aaKnown RBP4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ERP44Q9BS26 406 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ADAT1Q9BUB4 502 aaKnown RBP4.49□□□□□ -1.69
ATXN3-223ENST00000553686 ALG12Q9BV10 488 aa4.49□□□□□ -1.69
ATXN3-223ENST00000553686 C1orf50Q9BV19 199 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms