RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ADAT3Q96EY9 351 aaPredicted RBP12.6□□□□□ -0.39
SSH1-204ENST00000546697 C4orf36Q96KX1 117 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 PCGF1Q9BSM1 259 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 ADI1Q9BV57 179 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 ALG8Q9BVK2 526 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 MTCH1Q9NZJ7 389 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 HHLA2Q9UM44 414 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 SLC7A11Q9UPY5 501 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 RFPL4AA6NLU0 287 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 RFPL4AL1F8VTS6 287 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 DCKP27707 260 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
SSH1-204ENST00000546697 ARF6P62330 175 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 IKZF1Q13422 519 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
SSH1-204ENST00000546697 SLC9A3R2Q15599 337 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 CCDC58Q4VC31 144 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 OGFRL1Q5TC84 451 aaPredicted RBP12.59□□□□□ -0.39
SSH1-204ENST00000546697 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 CRIP3Q6Q6R5 217 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 Q8IYB0 196 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 CMTM4Q8IZR5 234 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 RDH10Q8IZV5 341 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 ZNRF1Q8ND25 227 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 RHOFQ9HBH0 211 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
SSH1-204ENST00000546697 A6NIN4 97 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 H0YAE9 185 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 J3QLW9 94 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ZNF737O75373 536 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ZFPL1O95159 310 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 BAG2O95816 211 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ZNF19P17023 458 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 PRKACBP22694 351 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 PRDX2P32119 198 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 RBP2P50120 134 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 DEFB112Q30KQ8 113 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 BRD3OSQ6XYD6 125 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 LHFPL3Q86UP9 236 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ANGPTL5Q86XS5 388 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 C11orf42Q8N5U0 333 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ZNF555Q8NEP9 628 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 ZNF488Q96MN9 340 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 METTL8Q9H825 291 aaKnown RBP12.58□□□□□ -0.4
SSH1-204ENST00000546697 ISG20L2Q9H9L3 353 aaKnown RBP12.58□□□□□ -0.4
SSH1-204ENST00000546697 AMBNQ9NP70 447 aa12.58□□□□□ -0.4
SSH1-204ENST00000546697 TRBV2A0A0J9YWF9 115 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 IRGMA1A4Y4 181 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 K7N7A8 449 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 SLC1A7O00341 560 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
SSH1-204ENST00000546697 NXPH2O95156 264 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 ATF1P18846 271 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 PEX2P28328 305 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 BAMBIQ13145 260 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 ZNF146Q15072 292 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 RCN1Q15293 331 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 SMN1Q16637 294 aaKnown RBP12.57□□□□□ -0.4
SSH1-204ENST00000546697 ODF4Q2M2E3 257 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 ZNF485Q8NCK3 441 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 SETD9Q8NE22 299 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 OR51A4Q8NGJ6 313 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 OR10AC1Q8NH08 325 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 SLC25A28Q96A46 364 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 BORCS8Q96FH0 119 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
SSH1-204ENST00000546697 DIMT1Q9UNQ2 313 aaKnown RBP12.57□□□□□ -0.4
SSH1-204ENST00000546697 CAB39Q9Y376 341 aaPredicted RBP12.57□□□□□ -0.4
SSH1-204ENST00000546697 SOX21Q9Y651 276 aaPredicted RBP12.57□□□□□ -0.4
SSH1-204ENST00000546697 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 E9PI62 339 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 F8VVB4 439 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 F8VWA3 439 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 TFF1P04155 84 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 TK1P04183 234 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 PIPP12273 146 aaPredicted RBP12.56□□□□□ -0.4
SSH1-204ENST00000546697 AZGP1P25311 298 aaKnown RBP12.56□□□□□ -0.4
SSH1-204ENST00000546697 GABRA2P47869 451 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 UBE2E1P51965 193 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 ATP1B3P54709 279 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 ACSM1Q08AH1 577 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 FOXL1Q12952 345 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 NCR3LG1Q68D85 454 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 HCP5Q6MZN7 132 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 SAXO1Q8IYX7 474 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 LHX4Q969G2 390 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 FGGYQ96C11 551 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
SSH1-204ENST00000546697 TRRAPQ9Y4A5 3859 aa12.55□□□□□ -0.4
SSH1-204ENST00000546697 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms