RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 METTL17Q9H7H0 456 aaPredicted RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 TMEM138Q9NPI0 162 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ZC4H2Q9NQZ6 224 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 C19orf12Q9NSK7 152 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 CKLFQ9UBR5 152 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ETV7Q9Y603 341 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 TANC2Q9HCD6 1990 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ESPL1Q14674 2120 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 NCOR2Q9Y618 2525 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 NBEAQ8NFP9 2946 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
VPS29-203ENST00000546588 C5orf63A6NC05 138 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 F5H5K5 113 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 RAD51DO75771 328 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 LYZL6O75951 148 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 SPDEFO95238 335 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PTBP3O95758 552 aaKnown RBP7.23□□□□□ -1.25
VPS29-203ENST00000546588 HLA-DQB1P01920 261 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 APOA1P02647 267 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 ERCC1P07992 297 aaPredicted RBP7.23□□□□□ -1.25
VPS29-203ENST00000546588 PATE4P0C8F1 98 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 HOXA5P20719 270 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 ACKR3P25106 362 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 TNFSF8P32971 234 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 MAGEB1P43366 347 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PPP5CP53041 499 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 FAM3AP98173 230 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 GALK2Q01415 458 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PLP2Q04941 152 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 ZNF846Q147U1 533 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 SLC25A35Q3KQZ1 300 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 GLYATL3Q5SZD4 288 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 SLC22A25Q6T423 547 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 DNM1P46Q6ZS02 220 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 FAM57BQ71RH2 274 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 BHLHA15Q7RTS1 189 aaPredicted RBP7.23□□□□□ -1.25
VPS29-203ENST00000546588 LAX1Q8IWV1 398 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 DNAAF1Q8NEP3 725 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 STEAP2Q8NFT2 490 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 OR52M1Q8NGK5 317 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 OR5D14Q8NGL3 314 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 BORCS5Q969J3 196 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PIGTQ969N2 578 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 SLC25A28Q96A46 364 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 SPSB1Q96BD6 273 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 REEP6Q96HR9 211 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 PGAM5Q96HS1 289 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 AJUBAQ96IF1 538 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 GCM1Q9NP62 436 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 CYSLTR2Q9NS75 346 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 TAS2R4Q9NYW5 299 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 STEAP1Q9UHE8 339 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 CMAHPQ9Y471 501 aa7.23□□□□□ -1.25
VPS29-203ENST00000546588 DSPP15924 2871 aaKnown RBP7.23□□□□□ -1.25
VPS29-203ENST00000546588 POLEQ07864 2286 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 IGKV1-9A0A0C4DH69 117 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 CTDSP2O14595 271 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 AKR7A2O43488 359 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 NCR1O76036 304 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 CST4P01036 141 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 SLC2A1P11166 492 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 CD79AP11912 226 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 PPP3CBP16298 524 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 BDKRB2P30411 391 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 APLNRP35414 380 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 NR4A2P43354 598 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 SOX2P48431 317 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 EVX1P49640 407 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 CAV3P56539 151 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 QRFPP83859 136 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 ZNF92Q03936 586 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 MXD1Q05195 221 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 IL24Q13007 206 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 ZNF79Q15937 498 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 TBC1D28Q2M2D7 210 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 GAGE13Q4V321 117 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 C9orf135Q5VTT2 229 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 GLT8D1Q68CQ7 371 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 MYPOPQ86VE0 399 aaPredicted RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 CSNK2A3Q8NEV1 391 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 SLC30A7Q8NEW0 376 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 SEMA6DQ8NFY4 1073 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 OR1M1Q8NGA1 313 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 RND1Q92730 232 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 SLC25A38Q96DW6 304 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 C1orf147Q96MC9 270 aaPredicted RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 GPHA2Q96T91 129 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 CCDC32Q9BV29 185 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 MS4A7Q9GZW8 240 aaPredicted RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 SLC22A4Q9H015 551 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 PPP1R3EQ9H7J1 279 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 DECR2Q9NUI1 292 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 GHRLQ9UBU3 117 aa7.22□□□□□ -1.25
VPS29-203ENST00000546588 PRRC2CQ9Y520 2896 aaKnown RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
VPS29-203ENST00000546588 RTTNQ86VV8 2226 aa7.21□□□□□ -1.25
VPS29-203ENST00000546588 A0A0A6YYH2 397 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms